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    TransBench is a translational research agent that takes free-text clinical observations, decomposes them into biological axes, generates falsifiable hypotheses grounded in PubMed evidence, and designs reproducible computational experiments with concrete datasets for Claude Science.
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    MCP server that turns a medRxiv DOI into clean markdown full text and provides free, relevance-ranked preprint search via Europe PMC.
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    Apache 2.0
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    Integrates AlphaFold DB and eight other biomedical data sources into MCP tools for variant clinical reporting, disease-target analysis, structural intelligence, and drug repurposing, with results persisted to a local SQLite knowledge graph.
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    Apache 2.0
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    An MCP server that connects AI assistants to OpenEMR instances to manage patient records, clinical trends, and medication safety. It provides 17 tools for tasks such as patient search, drug interaction checks, and generating comprehensive health trajectories and visit preparations.
    17
    MIT
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    Converts messy metabolite names into standard database identifiers (KEGG, HMDB, ChEBI, PubChem, InChIKey) and performs crosswalking to Mouse-GEM for metabolic model input, with deterministic tools and an LLM reasoning layer for identity disambiguation.
    20
    MIT
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    Automatically analyzes and dispatches user tasks to appropriate handlers, supporting development task processing via Miyabi Agent and medical AI academic article generation. Provides intelligent task classification and routing for development, writing, and general tasks.
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    Enables AI assistants to look up, search, validate, navigate hierarchies, and expand value sets for SNOMED CT clinical terminology through the Model Context Protocol.
    7
    Apache 2.0
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    An MCP server that enables AI assistants to generate, score, and analyze DNA sequences using the evo2 genomic foundation model. It supports multiple execution modes including local GPU, SLURM clusters, and the Nvidia NIM cloud API for tasks like variant effect prediction and sequence embedding.
    MIT
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    MCP server for interacting with Galaxy bioinformatics platform, enabling AI assistants to connect to Galaxy instances, search and execute tools, manage workflows, and access other features.
    37
    MIT
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    Turns the Cochrane Library into a tool for AI agents to search and retrieve clinical evidence, including systematic reviews, trials, and plain-language summaries.
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    MIT
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    Enables MCP clients like Claude Desktop to interact with openEHR REST APIs (EHRbase) for creating compositions, managing EHRs, listing templates, and executing AQL queries.
    18
    MIT
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    MCP-native scientific skills for reproducible computational biology and AI-driven drug-discovery workflows. It combines deterministic scientific tools with an MCP server to give AI agents real computational capabilities.
    Apache 2.0