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    An MCP server that provides access to the Kyoto Encyclopedia of Genes and Genomes (KEGG) database, offering 30 tools for searching and analyzing biological data like pathways, genes, and compounds. It supports integration with LangChain and Ollama to enable LLMs to interact with comprehensive genomic and chemical datasets.
    8
    MIT
  • F
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    quality
    C
    maintenance
    Provides a stateless Streamable HTTP endpoint for listing and retrieving laboratory preparation policies, checking preparation requirements, and returning remote server time.
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    Enables comprehensive biomedical literature research through PubMed database access with advanced search, full-text retrieval, citation analysis, and batch processing capabilities. Supports both local deployment and cloud hosting for seamless integration with AI assistants.
    1
    MIT
  • F
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    maintenance
    Provides oncology data (research, news, FDA approvals, clinical trials) and IBM MAMMAL biomedical predictions (PPI, DTI, ClinTox) as MCP tools. Allows AI agents to query cancer datasets and run predictions through a remote MCP server.
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    Identifies plants from photos and determines whether a species is native, introduced, or invasive in a given country, drawing on GBIF, GRIIS, and GISD data, and also provides management recommendations and country alien-species lists.
    4
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  • A
    license
    A
    quality
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    Enables AI agents to retrieve cited pharmacogenomic and gene-variant information, including drug–gene guidance from CPIC/DPWG and rsID lookups, so responses can quote curated sources instead of relying on memory. A local package also lets users read raw DNA files on their own computer without sending the file data to the remote service.
    2
    39 PyPI
    MIT
  • A
    license
    A
    quality
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    maintenance
    Enables LLM agents to search biomedical literature, retrieve article details, find related papers, manage caching, and download open-access full texts through MCP with structured, agent-friendly responses.
    5
    Apache 2.0
  • A
    license
    A
    quality
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    maintenance
    Enables analysis of pgsc_calc polygenic score matching outputs, flagging warnings and silent errors while surfacing effect-weight coverage, lost variants, strand issues, missing data, and actionable QC reports.
    2
    MIT
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    A
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    Enables bioinformatics analysis through natural language conversations with Claude Desktop, automatically generating and executing Python scripts to produce HTML reports and visualizations.
    3
    13 npm
    9
    MIT
  • A
    license
    A
    quality
    A
    maintenance
    Enables reading a patient's own Epic MyChart portal data — test results, medications, allergies, immunizations, health issues, goals, visits, messages, insurance, care team and billing — by relaying requests through the signed-in browser tab or signing in server-side with human-in-the-loop MFA. It also lets the active patient reply to Message Center conversations after an explicit confirmation step.
    24
    634 npm
    1
    MIT
  • F
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    Provides read/write access to any FHIR-compliant healthcare API with built-in validation, supporting resource management, search operations, and granular permissions through natural language.
    5
    1
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    Enables querying clinical trial information from the Chinese Clinical Trial Registry (ChiCTR) by searching trials with keywords, registration numbers, or years, and retrieving detailed trial information.
    4
    59 npm
    5
    Apache 2.0
  • F
    license
    B
    quality
    A
    maintenance
    BioMCP is an open-source MCP server that connects any AI assistant to 15 open bioinformatics databases with zero configuration. It provides 23 tools for literature, sequences, BLAST, structures, enrichment, annotations, genomes, interactions, variants, domains, compounds, and single-cell data.
    73
    14
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  • A
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    quality
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    maintenance
    MCP server that interfaces with the NCBI Entrez API to fetch detailed information about genes and proteins, enabling gene searches, gene/protein metadata retrieval, and symbol searching with organism filtering.
    4
    3
    MIT
  • A
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    Enables querying US regulated-care providers (GLP-1 clinics) with tools for searching, retrieving details, and checking compliance, using natural language or function calls.
    2
    MIT
  • A
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    quality
    B
    maintenance
    Veterinary clinic network in Moscow (20 clinics, open 24/7). Find a clinic with live ratings, check live prices for 900+ services, see open appointment slots, book a real visit, run a vet-approved symptom triage, check pet food safety, and query a knowledge base of 3,700+ vet-reviewed Q&As. Remote Streamable HTTP server at https://bio.vet/mcp, no auth required. Tools operate in Russian.
    MIT
  • A
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    quality
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    maintenance
    MCP server for interacting with Galaxy bioinformatics platform, enabling AI assistants to connect to Galaxy instances, search and execute tools, manage workflows, and access other features.
    39
    MIT
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    Enables AI agents to securely interact with FHIR R4-based EMRs, supporting read, search, create, and update operations on any FHIR resource type across systems like Epic, Cerner, and OpenEMR.
    311 npm
    MIT
  • A
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    quality
    C
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    Enables searching herb-drug and drug-drug interactions by name, alias, or item ID, and retrieving Permitted Daily Exposure (PDE) reports for active pharmaceutical ingredients. A single stdio process exposes all tools, with credentials only required for the databases each tool uses.
    8 npm
    1
    MIT
  • A
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    Enables molecular generation, optimization, and analysis through NVIDIA MolMIM API. Supports generating drug-like molecules with desired properties, extracting molecular embeddings, and exploring chemical space around seed molecules.
    1
    MIT
  • A
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    A
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    Enables AI assistants to query authoritative sources such as FDA, WHO, PubMed, RxNorm, and ClinicalTrials.gov for drug information, health statistics, medical literature, pediatric guidance, and clinical guidelines. Runs locally with no API keys required and includes resilience features like caching, rate limiting, circuit breakers, and health checks.
    96 npm
    ISC
  • A
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    Enables interaction with FHIR resources on Google Cloud Healthcare API through a SmartOnFHIR gateway secured by Firebase Auth, providing access to patient data, medical records, and medical research tools like PubMed.
    1
    MIT
  • A
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    A local stdio server that lets AI agents search 59 bundled scientific illustration assets, create and edit figure projects through validated, revision-checked operation batches, and export editable SVG, draw.io, or .biocanvas files with attribution. It runs without API keys or remote listeners and confines its writes to named projects inside a configured workspace directory.
    MIT