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![M3 Memory]

M3 Memory

M3 treats agent memory as a distributed-systems problem, not a retrieval feature. Instead of every tool (Claude, Gemini, OpenCode, …) keeping its own throwaway memory, M3 is a shared, evolving, bitemporal knowledge base that multiple heterogeneous agents and machines read and write — built to answer "how do agents maintain a consistent, evolving, temporal knowledge base over months and years?" rather than just "how do we retrieve a chunk?"

That framing is what makes the rest different: memory as persistent infrastructure, bitemporal history ("what did we believe last Tuesday, and when was it corrected?"), automatic contradiction management (not just append-and-hope), a memory-first MCP operational API (not a bare store/fetch), and local-first without giving up cross-agent interoperability.

Local-first Memory Framework for AI Agents · 99.2% LongMemEval-S retrieval @ k=10 · Supports Claude · Gemini · Antigravity · OpenCode · OpenClaw · Hermes · MCP-native and plugins · Hybrid search (FTS5 + vector + MMR) · GDPR · FIPS 140-3 deployment-ready · 100% local (fully offline) or cloud capable

In one sentence

M3 is a persistent, local-first memory layer for AI coding agents — a shared, bitemporal knowledge base that multiple agents read and write over MCP.

Works with

Claude Code · Gemini CLI · Aider · Google Antigravity · OpenCode · Hermes · any MCP agent

M3 is

a memory layer · an MCP server · a hybrid retrieval engine · a bitemporal knowledge base

M3 is not

an LLM · a chatbot · a plain vector database · a RAG framework · an IDE

For you if

you use a desktop coding agent and want memory that's private, offline-capable, and shared across tools

Maturity

production-grade — lightweight by design (SQLite primary), scales out to PostgreSQL for demanding environments; see features.json

"Wait, you remember that?" — Stop re-explaining your project to your AI. Give it a long-term brain that stays 100% on your machine.

🚀 New to M3? Start here with our 5-minute "Human-First" guide.

Works with Claude Code, Gemini CLI, Aider, Google Antigravity, OpenCode, Hermes Agent, and any MCP-compatible agent. Quick one-line command to have your agent install chat log sub-system which saves verbatim chat log info, before compaction, with zero lag/latency and 100% retrieval recall. Just tell your AI agent "install m3-memory chat log sub-system" and your agent will automatically install it with all the proper hooks with some minimal customization questions from you (you can accept the default answers).

👉 I've read enough, I just want to install it on Windows, macOS, or Linux.


🧠 Memory model at a glance

Not a vector store with RAG sugar — a typed, bitemporal, confidence-scored, self-maintaining knowledge base. Every point below is a first-class column or named function, not a roadmap item (full model →):

  • Typed & structured — every memory has type, source, confidence, scope, provenance (change_agent), and salience (importance, decay_rate) — a database of facts, not a transcript.

  • Bitemporal history — separate valid-time and transaction-time, so m3 answers "what did we believe last Tuesday, and when was it corrected?" — superseded facts are closed, not deleted.

  • Automatic contradiction handling — conflicts are detected on write and the stale fact is superseded (with corroboration_count / contradiction_count + a Bayesian confidence posterior), instead of piling up contradictory history.

  • Self-maintaining lifecycle — decay, dedup, consolidation into higher-order belief memories, TTL/expiry, retention, and GDPR erasure.

  • Write-gating — high-signal memories are promoted through an enrichment queue; a content-safety gate rejects injection at the write boundary. Remember fewer things, better.

  • Explainable, goal-aware retrieval — hybrid (vector + FTS5 BM25 + MMR + rerank), intent-routed by query type, and memory_suggest returns the per-result score breakdown (vector / bm25 / recency / title-overlap → final) so you can ask "why did you remember this?" and get numbers. See CONFIDENCE_AND_TRUST.md.

  • Measured, not asserted — LongMemEval-S 92% end-to-end QA, 99.2% recall@10 (report).


Related MCP server: Smriti

📦 Install

curl -fsSL https://raw.githubusercontent.com/skynetcmd/m3-memory/main/install.sh | bash

Installs on macOS or Linux with the single command above. Use this to install on Windows. Use this link to install manually and this to examine the script and what it does.

Claude Code users can also install as a plugin instead — gets you 15 /m3:* slash commands, two curator subagents (m3:curate-memory, m3:curate-chatlog), and auto-wired hooks:

/plugin marketplace add skynetcmd/m3-memory
/plugin install m3@skynetcmd

Plugin reference · Claude.ai (web/desktop) connector

Google Antigravity users can install the plugin directly:

agy plugin install https://github.com/skynetcmd/m3-memory

Plugin reference

Hermes Agent users can install the memory-provider plugin directly (supports optimal replacement of default memory or parallel coexistence for rich SOTA retrieval):

# Handled automatically via our setup wizard:
m3 setup

Plugin integration guide


Add to your MCP config:

{
  "mcpServers": {
    "memory": { "command": "m3" }
  }
}

🚀 One-command setup

pip install m3-memory
m3 setup

m3 setup is an interactive wizard. It detects every agent on PATH (Claude Code, Gemini CLI, OpenCode, OpenClaw), asks a handful of questions, then drives the full install end-to-end: system payload, sovereign CPU embedder (BGE-M3 on port 8082), per-agent MCP wiring, chatlog hooks, and a brief doctor health check. Restart your agent — that's it.

🛡️ Sovereign by default

The embedder ships in the repo. Our own BGE-M3 CPU embedder runs as a small always-on service on 127.0.0.1:8082 after m3 setup. No LM Studio, no Ollama, no GPU, no internet required for embedding to work.

Embedder path

When it's used

What you do

Sovereign CPU (port 8082)

Always installed by m3 setup. Concurrency=2 BGE-M3, GGUF bundled via Git LFS at _assets/models/bge-m3-Q4_K_M.gguf.

Nothing — it's the default.

GPU in-process

Optional opt-in for ~10-50× faster embedding. CUDA / Vulkan / Metal auto-detected.

m3 embedder install-gpu (needs the matching GPU toolchain).

External (Ollama, LM Studio, vLLM, …)

Power users who want a different model or shared host service.

Set EMBED_BASE_URL to your endpoint; m3 falls back to it if the sovereign service is down.

Want auto-classification, summarization, and consolidation? Load a small chat model for generation (e.g. qwen2.5:0.5b via Ollama, or any 0.5–1B instruct GGUF). M3 auto-selects it; embedding-only features work without it. See docs/QUICKSTART.md → Optional: load a small chat model.

⚡ Auto-Oxidation is ON by default. Performance-critical hot paths (MMR rerank, batch cosine, FTS compile, redaction) run on an optional in-process Rust core (m3_core_rs, a local wheel — no service), with silent pure-Python fallback when it's absent. Micro-benchmarks show large wins where they matter (up to ~846× on packed MMR rerank, ~97–178× on batch-cosine). Full table + methodology: docs/OXIDATION_BENCHMARKS.md. Opt out with M3_CORE_RS_DISABLE=1.

Restart your agent. Done!


🎚️ 100+ tools, but they don't all crowd your context — domain gating keeps the catalog small

M3 exposes 100+ MCP tools so power users can customize at fine granularity — single-id deletes, bulk variants, per-store searches, KG traversals, GDPR primitives, agent handoffs, watch-mode admin, the lot. Most agents never touch most of them in a typical session.

To avoid burning context space on tool schemas you won't use, m3 groups its catalog into 8 domains (memory, chatlog, files, entity, agent, tasks, conversations, admin) and loads them lazily. At MCP startup only the essentials register (6 data tools — memory + chatlog + files search/write — plus the 4 always-on dispatcher/meta tools); the rest expose on demand when the agent calls tools_load_domain(domain="…").

Measured on m3 main with the gpt-4o tokenizer over the serialized tool schemas ({name, description, parameters} per tool, as registered on the MCP wire):

Mode

Tools at startup

Tokens at startup

% of 200 K window

% of 256 K window

Lazy (default)

10

~3,540

1.8 %

1.4 %

Typical session (lazy + agent loads files + memory)

64

~17,975

9.0 %

7.0 %

Eager (M3_TOOLS_LAZY=0 — legacy)

107

~24,918

12.5 %

9.7 %

For comparison, common alternatives: a 40-tool GitHub MCP server ≈ 12,000 tokens; the full 93-tool GitHub MCP server ≈ 55,000 tokens (MCP Token Counter). m3's lazy default keeps the always-on surface ~7× smaller than the full eager catalog while giving the agent the full tool set whenever it actually needs them.

Disable with M3_TOOLS_LAZY=0 if your client doesn't support dynamic tool registration or you want every tool at startup. Direct Python imports (from memory_bridge import memory_write) always expose every tool — this only gates the MCP wire surface.


🛡️ Air-gapped deployment

M3 is sovereign by default — the baseline install needs no external services. For fully air-gapped environments, the only extra step is to pre-stage the repo (with the LFS-tracked GGUF materialized) and wheels on a connected machine, then sneakernet the folder and pip install --no-index. No curl, no LM Studio, no third-party model server.

M3 is also FIPS 140-3 deployment-ready: it implements no custom crypto, uses only FIPS-approved algorithms, and routes every operation through a single provider boundary so a validated wolfCrypt module can serve it (M3_FIPS_MODE=1 fails closed if absent). M3 itself is not a CMVP-validated module — no application is.

Full guides: Sovereign & Air-Gapped Deployment · FIPS module boundary & tiers. Config/payload/backups live under ~/.m3-memory (override with M3_MEMORY_ROOT).


🔮 What happens next (benefits of use)

You're at a coffee shop on your MacBook, asking Claude to debug a deployment issue. It remembers the architecture decisions you made last week, the server configs you stored yesterday, and the troubleshooting steps that worked last time — all from local SQLite, no internet required.

Later, you're at your Windows desktop at home with Gemini CLI, and it picks up exactly where you left off. Same memories, same context, same knowledge graph. You didn't copy files, didn't export anything, didn't push to someone else's cloud. Your PostgreSQL sync handled everything in the background the moment your laptop hit the local network.


💡 Why this exists

Most AI agents don't persist state between sessions. You re-paste context, re-explain architecture, re-correct mistakes. When facts change, the agent has no mechanism to update what it "knows."

M3 Memory gives agents a structured, persistent memory layer that handles this.


⚡ What it does

Autonomous cognitive loop — optional background worker (m3_cognitive_loop.py) that extracts facts, resolves contradictions, and links entities while you sleep. Turns raw chat logs into a refined knowledge graph without human intervention.

Persistent memory — facts, decisions, preferences survive across sessions. Stored in local SQLite.

Hybrid retrieval — FTS5 keyword matching + semantic vector similarity + MMR diversity re-ranking. Automatic, no tuning required.

Contradiction handling — conflicting facts are automatically superseded. Bitemporal versioning preserves the full history.

Knowledge graph — related memories linked automatically on write. Nine relationship types, 3-hop traversal. Entity extraction (entity_search, entity_get) supplements the graph with first-class people / places / things resolution. The entity-graph layer ships a stock entity-type and predicate vocabulary, and it's user-configurable: point M3_ENTITY_VOCAB_YAML at your own profile to swap or extend the vocab for your domain — no code changes.

Zero-config local installpip install m3-memory plus one line in your MCP config, or m3 setup for a one-command wizard that detects agents, wires settings.json + hooks, installs the sovereign CPU embedder, and verifies with a brief doctor check in one shot. SQLite stores everything locally — no external databases, no cloud calls, no API costs. Works offline.

Context-frugal tool catalog — 100+ MCP tools grouped into 8 domains, loaded lazily. Startup surface is ~3,540 tokens (~1.8% of a 200K window) vs ~24,918 if every tool registered eagerly. Agent expands a domain when it needs the rest. See § 100+ tools, domain-gated.

Cross-device sync — optional, easy-to-add bi-directional delta sync via PostgreSQL or ChromaDB, with manifest-driven multi-DB support for fleet deployments. Set one environment variable and your memories follow you across machines.


📚 Learn more

🚀 Getting started

👥 Multi-agent orchestration

Core features

🧩 Multi-agent example

🏗️ System design

⚖️ Compare M3 to alternatives (sovereign substrates table)

🔧 Implementation details

⚙️ Configuration

🤖 Agent rules + all tools

🛡️ Compliance & assurance (FISMA, CMMC, GDPR)

🏠 Homelab patterns

🔍 Myths & facts (verify claims about M3)

🗺️ Roadmap

📜 Changelog

🛠️ Operations playbook (run the memory brain)

🧩 Capability matrix (every tool, grouped)

🤖 AI agent context profile (inject into other LLMs)

🔢 Machine-readable features (features.json)


🎯 Who this is for

M3 is a good fit if…

🤖 You use coding agents

Claude Code, Gemini CLI, Aider, OpenCode, or any MCP-compatible agent. Non-MCP clients work too via the built-in HTTP proxy.

👥 You run multiple agents

Coordinating Claude + Gemini + a background worker on a shared local store, with handoffs and per-agent scoping.

🛡️ You need compliance primitives

gdpr_forget / gdpr_export as MCP tools, bitemporal valid-time / transaction-time, audit trail, no telemetry.

💾 You want pure local-first

Single-file SQLite. Works offline. No external database, no cloud calls, no API costs by default.

🌐 You want memory across devices

Optional bi-directional delta sync via PostgreSQL or ChromaDB — your data, your hardware.

M3 is not the right tool if…

Try instead

You're building LangChain / LangGraph / CrewAI pipelines and want framework-native memory

Mem0, LangChain Memory / LangMem

You want a hosted agent runtime with managed scaling, dashboards, and SLAs

Letta, Mem0 Pro

You want a fully managed, hosted retrieval service and don't need local-first / sovereignty

agentmemory, Hindsight

You only need in-session chat context that's discarded after the conversation

Your agent's built-in conversation buffer; M3 is overkill


🛡️ Why trust this

100+ MCP tools

Memory, search, GDPR, refresh lifecycle — plus agent registry, handoffs, notifications, tasks, entity graph, fact enrichment, chat-log capture, and a 26-tool files-memory layer (directory ingestion, hierarchical chunking, ascension to core memory, watch-mode staleness review)

563 end-to-end tests

Covering write, search, contradiction, sync, GDPR, maintenance, orchestration, and the files-memory pipeline

Explainable retrieval

memory_suggest returns vector, BM25, and MMR scores per result

SQLite core

No external database required. Single-file, portable, inspectable

GDPR compliance

gdpr_forget (Article 17) and gdpr_export (Article 20) as built-in tools — see compliance & assurance for FISMA / CMMC alignment too

Self-maintaining

Automatic decay, dedup, orphan pruning, retention enforcement

Audited security posture

Periodic Bandit + pip-audit + secrets-scan reports published under docs/audits/; CI gates on core-dep CVEs

Apache 2.0 licensed

Free. No SaaS tier, no usage limits, no lock-in

🧭 Maturity. The core — storage, retrieval, GDPR, MCP tools, sync — is stable and fully covered by the test suite. The enrichment + reflector pipeline shipped through 2026-Q2 with live-fire experience behind it and gets sharper with every release. M3 runs in production today — a durable memory substrate for personal, homelab, and multi-agent developer workflows, from a single laptop to a fleet of heterogeneous agents sharing one evolving knowledge base.

Built privacy-focused from the ground up. For regulated environments, M3 ships with first-class compliance primitives rather than bolting them on:

  • GDPRgdpr_forget (Article 17, right to erasure) and gdpr_export (Article 20, data portability) as built-in MCP tools.

  • FIPS 140-3 deployment-ready crypto boundary — AES-256-GCM secrets vault, PBKDF2-HMAC-SHA256 key derivation, and TLS 1.3 with FIPS-approved ciphersuites, all routed through a single provider boundary. The crypto provider is obtained separately, not bundled: point it at the CMVP-validated wolfSSL FIPS module (under M3_FIPS_STRICT) for a validated deployment, or use the open-source wolfCrypt build for everything else — the validation belongs to that module, not to M3.

  • Bitemporal audit log — valid-time and transaction-time captured on every write, backed by a tamper-evident hash chain.

  • Air-gap operability — no network listeners, no telemetry, no implicit egress.

  • Framework alignment — mapped to NIST SP 800-53 (FISMA) and CMMC 2.0 / NIST SP 800-171.

M3 is an application, not a validated cryptographic module or a certified system — the certificate and the ATO belong to your deployment. Evaluate it against your specific requirements first, as you should any memory tool. See docs/COMPLIANCE.md and docs/FIPS_MODULE_BOUNDARY.md for the precise boundary, and docs/MYTHS_AND_FACTS.md for where we draw the line.


📊 Benchmarks

Session Hit-Rate @ k (retrieval-only)

k

SHR

Hits / 500

vs. prior report

5

98.2%

491 / 500

+2.0pp (was 96.2%)

10

99.2%

496 / 500

+2.4pp (was 96.8%)

20

100.0%

500 / 500

first time reported

k=10 is M3's default search depth — every column above uses the same engine settings the production memory_search tool ships with.

Binary per-question SHR (recall_any@k) — same convention the adjacent LongMemEval-S submissions report as "R@k". Measured on longmemeval_s_cleaned.json (500 questions), no oracle metadata, BGE-M3 hybrid retrieval (FTS5 + vector + MMR). Deterministic at T=0; reproducibility variance <0.1pp.

End-to-End QA Accuracy

92.0% on LongMemEval-S (460/500 correct) — a 500-question evaluation of long-horizon conversational memory — with no oracle metadata (routing inferred from the question text at runtime). Answer model: Claude Opus 4.6; judge: gpt-4o (unmodified upstream).

Question type

n

Accuracy

single-session-user

70

94.3%

single-session-assistant

56

96.4%

single-session-preference

30

80.0%

multi-session

133

87.2%

temporal-reasoning

133

95.5%

knowledge-update

78

93.6%

Overall

500

92.0%

The retrieval-vs-QA gap (100% SHR @ k=20 → 92.0% QA) is dominated by answer-model errors on already-retrieved gold evidence, not retrieval misses.

Full methodology, ablations, and honest caveats: benchmarks/longmemeval/LME-S_Benchmarking_Report.md. (An earlier oracle-routed configuration scored 89.0%.) Discussion threads: xiaowu0162/LongMemEval#49 (v3, no-oracle) and #43 (v1). LoCoMo audit pending — see benchmarks/locomo/README.md.

🔍 Verifying claims about M3. If a third-party AI assistant has described M3 with features or scores that don't match what's documented here, it's almost certainly hallucinating. See docs/MYTHS_AND_FACTS.md for the source-of-truth list of what M3 actually implements (and what it doesn't).


🧰 Core tools

Most sessions use three tools. The rest is there when you need it.

Tool

Purpose

memory_write

Store a fact, decision, preference, config, or observation

memory_search

Retrieve relevant memories (hybrid search)

memory_update

Refine existing knowledge

memory_suggest

Search with full score breakdown

memory_get

Fetch a specific memory by ID

All tools are documented in docs/AGENT_INSTRUCTIONS.md and the full inventory lives in docs/MCP_TOOLS.md.


🤖 For AI agents

M3 Memory exposes 100+ MCP tools for storing, searching, updating, and linking knowledge — including conversation grouping, a refresh lifecycle for aging memories, agent registry, handoffs, notifications, tasks, entity-graph extraction, fact enrichment, chat-log capture for multi-agent orchestration, and a files-memory layer that ingests entire directories (markdown, PDF, plain text) into a hierarchical store with hybrid search, fact extraction, ascension to core memory, and watch-mode staleness review. Any MCP-compatible agent can use them automatically.

To teach your agent best practices (search before answering, write aggressively, update instead of duplicating), drop the compact rules file into your project:

examples/AGENT_RULES.md

Full tool reference with all parameters and behaviors: docs/AGENT_INSTRUCTIONS.md


🪄 Let your agent install it

Already inside Claude Code or Gemini CLI? Paste one of these prompts:

Claude Code:

Install m3-memory for persistent memory. Run: pip install m3-memory
Then add {"mcpServers":{"memory":{"command":"m3"}}} to my
~/.claude/settings.json under "mcpServers". For best retrieval, ensure 
Ollama is running with qwen3-embedding:0.6b (optional, falls back 
to keyword search without it). Then use /mcp to verify the memory server loaded.

Gemini CLI:

Install m3-memory for persistent memory. Run: pip install m3-memory
Then add {"mcpServers":{"memory":{"command":"m3"}}} to my
~/.gemini/settings.json under "mcpServers". For best retrieval, ensure 
Ollama is running with qwen3-embedding:0.6b (optional, falls back 
to keyword search without it).

After install, test it:

Write a memory: "M3 Memory installed successfully on [today's date]"
Then search for: "M3 install"

Add the chat log subsystem

Want auto-capture of every Claude Code / Gemini CLI / OpenCode / Aider conversation into a searchable, promotable chat log store? Once m3-memory is wired up, just say:

Install the m3-memory chat log subsystem.

The agent runs bin/chatlog_init.py, wires the host-agent hook, and installs the embed sweeper schedule. See docs/CHATLOG.md for the architecture and ops guide.


🎬 See it in action

Contradiction detection

Hybrid search with scores

Cross-device, cross-platform sync


💬 Community

Discord   GitHub Issues   Contributing · Good first issues


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