rnaseq-mcp
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TDQS
Scored across 7 tools
Each tool has a clear, distinct purpose: environment inspection, code execution per language, output retrieval, data exploration (listing and reading), and session reset. No two tools overlap in functionality.
All tool names follow a consistent verb_noun pattern (e.g., describe_session, execute_python, list_data_files). The naming is predictable and easy to interpret.
With 7 tools, the server covers all essential activities for RNA-seq analysis: environment setup, code execution, data exploration, output retrieval, and session management. The count is well-scoped and not excessive.
The tool surface provides a solid foundation for RNA-seq analysis: data listing, reading, execution in both R and Python with relevant packages, output retrieval, and reset. A minor gap is the lack of a direct quality control or standard pipeline tool, but the execution tools suffice.