normalize_variant
Normalize VCF-style, HGVS, or rsID variants to a standard representation on an explicit genome assembly, making them comparable and analysis-ready.
Instructions
Normalize a variant (VCF-style, HGVS or rsID) on an explicit assembly with a trace. Not implemented in this build: returns error code 'unsupported' (E8).
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| hgvs | No | ||
| rsid | No | ||
| sources | No | Source names; default all available. | |
| variant | No | ||
| assembly | No | ||
| reference | No |
Output Schema
| Name | Required | Description | Default |
|---|---|---|---|
| data | No | ||
| error | No | Set when status is error. | |
| errors | No | Per-source failures in partial results. | |
| limits | No | ||
| status | Yes | ||
| warnings | No | ||
| operation | Yes | ||
| provenance | No | ||
| truncation | No | ||
| source_status | No | ||
| schema_version | No | 1 |