RegNetwork MCP
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Alternatives to RegNetwork MCP
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Related Servers
- AlicenseAqualityBmaintenanceRead-only access to a curated, evidence-labelled corpus of mTOR research: studies, entities, signed pathway relations with supporting and conflicting evidence, and open questions.11CC BY-4.0
- AlicenseNot gradedqualityAmaintenanceEnables building and analyzing signalling networks from interaction databases through a Model Context Protocol server.497 PyPI20GPL 3.0

RNAcentral MCP Serverofficial
AlicenseAqualityAmaintenanceEnables complex searches, sequence mapping, genomic analysis, and metadata retrieval for non-coding RNA sequences from the RNAcentral database.8153 PyPIMIT- AlicenseNot gradedqualityBmaintenanceEnables searching a manually curated database of stable macromolecular protein complexes by protein or complex name, gene, GO term, or biological process, and fetching individual records by accession to retrieve subunits with UniProt identifiers, biological roles, and stoichiometry. Complements UniProt, IntAct, and STRING, and can be used keyless over a hosted gateway endpoint or run locally over stdio.358 npmMIT
- AlicenseBqualityDmaintenanceA comprehensive Model Context Protocol (MCP) server for accessing the STRING protein interaction database. This server provides powerful tools for protein network analysis, functional enrichment, and comparative genomics through the STRING API.64MIT
- AlicenseNot gradedqualityCmaintenanceEnables AI agents to resolve genes, diseases, chemicals, variants and species to normalized ids, search ~36M PubMed abstracts and PMC full texts by free text or entity, and retrieve the machine-extracted relations between them with the supporting sentences and PMIDs. Supports auditing individual relations with full evidence passages and pulling per-article entity annotations with character offsets.255 npmMIT
TDQS
Scored across 9 tools
Each tool has a distinct role: status, entity resolution, exact interaction search, one-hop neighbor retrieval, subnetwork extraction, summarization, evidence retrieval, export, and official file download. The descriptions explicitly bound overlapping concepts such as search vs. neighbors and extraction vs. summarization.
All tool names use snake_case and follow a predictable verb_noun or verb_adjective_noun pattern. The verbs are clear and consistent across the set.
Nine tools is well-scoped for a regulatory network database connector. Each tool covers a necessary stage of the workflow: status, lookup, traversal, extraction, analysis, evidence, export, and download.
The surface covers the main read-only lifecycle for querying, analyzing, exporting, and downloading regulatory network data. Minor gaps remain, such as no standalone search by PMID or explicit alias enumeration, but the descriptions acknowledge these limitations.