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Related Servers

• 

  reactome-mcpofficial

  reactome

  A

  license

  B

  quality

  C

  maintenance

  Enables AI assistants to search, browse, analyze, and export biological pathway data from Reactome through natural language.

  Updated 5 days ago (2026-10-14 14:54 UTC)

  56

  97 npm

  6

  Apache 2.0

• reactome-mcp

  tc2fh

  A

  license

  A

  quality

  D

  maintenance

  Enables coding agents to interact with the Reactome pathway database, including search, lookup, hierarchy traversal, SBML/SBGN export, and gene-set enrichment analysis.

  Updated 4 months ago (2026-06-22 13:07 UTC)

  17

  MIT

• mcp-wikipathways

  pipeworx-io

  A

  license

  -Not graded

  quality

  B

  maintenance

  Enables AI agents to query the WikiPathways open community pathway database via natural language, part of the Pipeworx MCP gateway.

  Updated 22 days ago (2026-09-26 22:23 UTC)

  9 npm

  MIT

• KEGG MCP Server

  Augmented-Nature

  F

  license

  -Not graded

  quality

  D

  maintenance

  Enables natural language querying and analysis of KEGG biological databases, including pathways, genes, compounds, reactions, diseases, and drugs.

  Updated 10 months ago (2025-12-21 10:05 UTC)

  11

  -

• KEGG REST MCP

  pipeworx-io

  A

  license

  -Not graded

  quality

  B

  maintenance

  Enables AI agents to search and retrieve compounds, drugs, diseases, pathways, genes, enzymes, glycans, modules, and KO entries; fetch full parsed flat-file entries by ID; and list database contents through keyless REST tools.

  Updated 23 days ago (2026-09-26 19:24 UTC)

  33 npm

  MIT

• propaths-mcp

  Tahsin-Kazi

  A

  license

  A

  quality

  C

  maintenance

  Provides read-only access to the ProPaths verified protein interactome, letting AI agents search proteins, retrieve mechanistic interaction details, and explore pathway ontology through MCP tools, resources, and prompts.

  Updated 2 months ago (2026-08-26 16:45 UTC)

  11

  MIT