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Alternatives to BioStudies MCP Server

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    Related Servers

    • A
      license
      Not graded
      quality
      B
      maintenance
      Enables AI agents to search EBI BioSamples metadata for biological samples such as cell lines, tissues, and organisms by free-text keyword, and to fetch individual records by accession to retrieve taxId, organism, and characteristics like tissue, sex, and cell type. It can run as a hosted gateway endpoint or locally over stdio via npx.
      331 npm
      MIT
    • F
      license
      Not graded
      quality
      B
      maintenance
      Enables searching and retrieving biomedical literature from Europe PMC, including abstracts, full-text (JATS XML), text-mined annotations, citations, references, and database cross-links, through natural language queries and automated data staging.
      -
    • A
      license
      A
      quality
      C
      maintenance
      Enables users to search multiple public life-science data repositories (GEO, ENA, CELLxGENE, PRIDE, DataCite) with a single query, returning a unified ranked list of datasets with ontology-expanded terms and per-source error reporting.
      3
      MIT
    • A
      license
      Not graded
      quality
      C
      maintenance
      Enables search and access to MGnify public microbiome studies, biome vocabulary, and ~57,000 MAGs and isolate genomes with completeness, contamination, and GTDB taxonomy.
      248 npm
      MIT
    • A
      license
      Not graded
      quality
      C
      maintenance
      Enables searching ENA's public sequencing data by organism, study, platform, country or date, retrieving FASTQ/BAM download URLs and checksums, and discovering available result types and fields.
      185 npm
      MIT