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Alternatives to EBI BioSamples MCP

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    Related Servers

    • A
      license
      Not graded
      quality
      B
      maintenance
      Enables AI agents to browse the Gene Ontology through the EBI QuickGO API, including keyword search for GO terms, retrieval of a term's name, aspect, definition and synonyms by id, and listing the GO annotations tied to a UniProt accession. Runs keyless over HTTP or as a local stdio server, with an optional gateway route that lets plain-English questions be answered without choosing tools manually.
      318 npm
      MIT
    • A
      license
      Not graded
      quality
      B
      maintenance
      Enables AI agents to query Protein Data Bank in Europe (EBI) structural data by 4-character PDB ID, retrieving entry summaries, molecule/entity listings with chain lengths, and SIFTS cross-database mappings to UniProt accessions and residue ranges. Runs as a hosted gateway endpoint or a local stdio server with no authentication required.
      344 npm
      MIT
    • A
      license
      Not graded
      quality
      B
      maintenance
      Enables AI agents to look up molecular interactions from the EBI IntAct database by gene/protein name or UniProt ID, returning detection method, interaction type, organism, PubMed reference, and MI confidence score, along with fast interaction counts. It is keyless and available either through a hosted MCP endpoint, a plain HTTP API, or a local stdio server.
      322 npm
      MIT
    • A
      license
      Not graded
      quality
      B
      maintenance
      Enables searching EBI BioStudies, a keyless database of biological study descriptions, by keyword and retrieving full metadata for a single study by accession, including title, abstract, release date, and link counts. Results tie studies across EBI archives such as ArrayExpress and PRIDE, so agents can locate and inspect study records without authentication.
      336 npm
      MIT
    • A
      license
      A
      quality
      B
      maintenance
      Enables researchers to query public ENA and BioSamples genomics data in plain English through any MCP client, including counting records, searching samples, retrieving sample details, and checking metadata quality against project requirements.
      4
      MIT
    • A
      license
      Not graded
      quality
      B
      maintenance
      Enables AI agents to search CERN's open research data repository and retrieve records, files, and curated communities by DOI or keyword, covering datasets, software, papers, and presentations. Works keyless over HTTP or as a local stdio server, with no account required for initial calls.
      169 npm
      MIT