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openpharma-org

Unofficial HPO MCP Server

search_hpo_terms

Search Human Phenotype Ontology terms by keyword, ID, or synonym. Filter results by category and paginate for efficient retrieval in genetic research.

Instructions

Search for HPO terms by keyword, ID, or synonym. Supports pagination and filtering.

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
maxNoMaximum number of results to return (default: 20, max: 100)
queryYesSearch query - can be a keyword, HPO ID (e.g., HP:0001234), or synonym
offsetNoNumber of results to skip for pagination (default: 0)
categoryNoFilter by specific HPO categories (optional)
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

No annotations provided; description only mentions pagination and filtering but lacks details on case sensitivity, wildcards, result ordering, or error behavior. Does not compensate for missing annotations.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness3/5

Is the description appropriately sized, front-loaded, and free of redundancy?

Single sentence is concise but not efficient—it repeats what schema already conveys. Could be more informative without extra length.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness2/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

With 4 parameters, no output schema, and no behavioral details, the description under-informs agents. Missing info on output format, ordering, and limitations.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema coverage is 100%; description adds little beyond restating schema info. 'Supports pagination and filtering' is implicit from parameters.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

Description clearly states the action (Search), resource (HPO terms), and methods (by keyword, ID, or synonym). It distinguishes from siblings like get_all_hpo_terms by emphasizing free-text query support.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

No guidance on when to use this tool versus siblings. With 11 related tools, explicit usage context is missing.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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