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openpharma-org

Unofficial HPO MCP Server

get_hpo_ancestors

Retrieve all ancestor terms for any HPO term, navigating the phenotype hierarchy to find higher-level terms using the term ID.

Instructions

Get all ancestor terms for a given HPO term (all terms higher in the hierarchy)

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
idYesHPO term ID (e.g., HP:0001234 or just 0001234)
maxNoMaximum number of ancestors to return (default: 50)
offsetNoNumber of results to skip for pagination (default: 0)
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

No annotations provided, so description must cover behavioral traits. It only states the action without mentioning that it's read-only, pagination, or any side effects. The offset and max parameters hint at pagination, but this is not explained.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

Single sentence, front-loaded with the core purpose. No wasted words.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness3/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Given no output schema, description should briefly describe the return structure. It does not mention that the result is a list of HPO terms or any fields. For a simple ancestor lookup, this is a minor gap.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema coverage is 100% and already explains parameters well (e.g., ID format, max, offset). Description adds no new semantic value beyond what schema provides.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

Description clearly states 'Get all ancestor terms for a given HPO term' with explicit mention of hierarchy direction ('higher in the hierarchy'). This distinguishes well from siblings like get_hpo_children and get_hpo_parents.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines4/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

Description implies use case (retrieving all ancestors) but lacks explicit guidance on when not to use it or alternatives. The context of sibling tools like get_hpo_parents suggests a need for differentiation, which is absent.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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