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openpgx

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Alternatives to openpgx

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    Related Servers

    • gwas-mcp

      muslus
      A
      license
      C
      quality
      F
      maintenance
      Provides AI-powered access to major biological databases for GWAS and bioinformatics research. Enables natural language queries for protein, gene, variant, pathway, and drug discovery analysis.
      44
      1
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    • pgx-mcp

      Julius-Schmidt
      A
      license
      Not graded
      quality
      D
      maintenance
      Enables real-time pharmacogenomics analysis, including variant clinical significance, drug-gene interactions, and dosing guidelines, by connecting to ClinVar, PharmGKB, gnomAD, and other databases.
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    • DeepDNA MCP server

      alfonsoguv
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      A
      quality
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      Enables AI agents to retrieve cited pharmacogenomic and gene-variant information, including drug–gene guidance from CPIC/DPWG and rsID lookups, so responses can quote curated sources instead of relying on memory. A local package also lets users read raw DNA files on their own computer without sending the file data to the remote service.
      2
      43 PyPI
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    • GenomeMCP

      Eldergenix
      A
      license
      Not graded
      quality
      D
      maintenance
      Enables AI agents to query clinical genomics databases, retrieve supporting literature, analyze population genetics, and visualize biological pathways.
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    • Genomic-Agent-Discovery

      Sigomi
      A
      license
      A
      quality
      B
      maintenance
      Upload your raw DNA file from 23andMe, AncestryDNA, MyHeritage, FamilyTreeDNA, or any VCF -- and watch a team of AI agents fan out across 16+ public genomics databases, share discoveries with each other in real time, and produce a comprehensive health report. Everything runs on your machine. Nothing is uploaded anywhere.
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    Deploy Server
    One endpoint for every MCP toolRayrun runs every MCP server behind one URL and holds the credentials. Each call is decided per client, tool, and argument, then recorded.ray.runAd

    TDQS

    A3.6/5.0

    Scored across 16 tools

    Disambiguation3/5

    Several tools have overlapping purposes, notably the multiple 'full' report tools (diagnostic_all, full_pgx_report, full_report, full_risk_report) and multiple upload-related tools (upload_genome, upload_genome_chunk, upload_genome_start, get_upload_command, load_profile). Descriptions help but an agent could select the wrong one.

    Naming Consistency2/5

    Naming patterns are inconsistent: some use 'verb_noun' (check_medication, upload_genome), others use 'adjective_noun' (full_report, trait_report), and some are compound (get_upload_command, upload_genome_start). No coherent pattern across the set.

    Tool Count4/5

    16 tools cover a complex domain (pharmacogenomics, disease risk, traits, upload workflows) without being excessive. Each tool has a distinct role, though a few could potentially be consolidated.

    Completeness4/5

    The tool set covers major workflows: genome upload, medication and risk checking, comprehensive reports, and trait discovery. Minor gaps exist (e.g., no update/delete for saved research), but core needs are met.

    Maintenance

    ActivityInactive
    ResponsivenessNo issues

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