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MyGene MCP Server

by nickzren
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Python
Hybrid

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    Deploy Server
    One endpoint for every MCP toolRayrun runs every MCP server behind one URL and holds the credentials. Each call is decided per client, tool, and argument, then recorded.ray.runAd

    TDQS

    C2.3/5.0

    Scored across 26 tools

    Disambiguation2/5

    There are overlapping tools like query_homologous_genes and get_gene_orthologs, which both find cross-species homologs. Additionally, query_with_filters, build_complex_query, and search_by_field all appear to serve similar flexible querying purposes, causing confusion.

    Naming Consistency3/5

    Most tools follow a consistent get_gene_* or query_genes_by_* pattern, but there are deviations such as query_with_filters, build_complex_query, search_by_field, and export_gene_list that break the convention. The mixing of verbs like query, search, and build adds inconsistency.

    Tool Count2/5

    With 26 tools, the server exceeds the recommended range and feels heavy, even for a comprehensive gene API. While each tool may target a specific aspect, the sheer number makes it harder for agents to select the appropriate one.

    Completeness4/5

    The tool set covers a wide range of gene-related queries including diseases, chemicals, pathways, GO terms, expression, variants, and orthologs, with batch operations and export functionality. Minor redundancies exist but no obvious gaps for the MyGene.info domain.

    Maintenance

    ActivityInactive
    ResponsivenessNo issues

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