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millimap-mcp

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    Deploy Server
    One endpoint for every MCP toolRayrun runs every MCP server behind one URL and holds the credentials. Each call is decided per client, tool, and argument, then recorded.ray.runAd

    TDQS

    A3.6/5.0

    Scored across 12 tools

    Disambiguation4/5

    Most tools have distinct purposes, but the set of marker-related tools (find_markers, get_cluster_markers, genes_for_cell_type, search_genes) may cause some confusion as they all deal with marker genes, though descriptions clarify their specific roles.

    Naming Consistency4/5

    Tool names follow a verb_noun pattern in snake_case, which is consistent. However, 'genes_for_cell_type' deviates by starting with a noun instead of a verb, making it a minor inconsistency.

    Tool Count5/5

    With 12 tools covering clustering, annotation, marker retrieval, QC, and an escape hatch, the count is well-scoped for a single-cell analysis MCP server—each tool earns its place.

    Completeness3/5

    The tool surface covers core clustering and annotation but misses direct tools for data loading, normalization, or highly variable gene selection—essential preprocessing steps. The escape hatch partially fills these gaps but reliance on it for key operations indicates notable gaps.

    Maintenance

    ActivityInactive
    ResponsivenessNo issues

    Resources