get_toxicity_data
Retrieve toxicity data for chemical compounds from PubChem, including acute toxicity, ecotoxicity, and carcinogenicity information, using compound IDs.
Instructions
获取毒性实验数据
Args: cid: PubChem化合物ID
Returns: 包含急性毒性、生态毒性、致癌性等毒性数据的字典
Input Schema
TableJSON Schema
| Name | Required | Description | Default |
|---|---|---|---|
| cid | Yes |
Output Schema
TableJSON Schema
| Name | Required | Description | Default |
|---|---|---|---|
| result | Yes |
Implementation Reference
- pubchem_mcp/mcp_server.py:113-151 (handler)The MCP tool handler for 'get_toxicity_data', which orchestrates the call to the cache service and PubChem client to retrieve toxicity data.
@app.tool() async def get_toxicity_data(ctx: Context, cid: int) -> Dict[str, Any]: """ 获取毒性实验数据 Args: cid: PubChem化合物ID Returns: 包含急性毒性、生态毒性、致癌性等毒性数据的字典 """ try: # 初始化缓存服务 cache_service = CacheService() await cache_service.initialize() # 检查缓存 cached_data = await cache_service.get_toxicity_data(cid) if cached_data: await cache_service.close() return {"cid": cid, **cached_data} # 从PubChem获取数据 async with PubChemClient() as client: toxicity_data = await client.get_toxicity_data(cid) if "error" in toxicity_data: await cache_service.close() return {"cid": cid, "error": toxicity_data["error"]} # 缓存结果 await cache_service.set_toxicity_data(cid, toxicity_data) await cache_service.close() return {"cid": cid, **toxicity_data} except Exception as e: logger.error(f"Error getting toxicity data for CID {cid}: {e}") return {"cid": cid, "error": str(e)}