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You're Wasting Tokens... That Stops NOW

Most AI agents still explore documentation the expensive way:

open file → skim hundreds of irrelevant paragraphs → open another file → repeat

That burns tokens, floods context windows with noise, and forces models to reason through a lot of text they never needed in the first place.

jDocMunch-MCP lets AI agents navigate documentation by section instead of reading files by brute force.
It indexes a documentation set once, then retrieves exactly the section the agent actually needs, with byte-precise extraction from the original file.

Task

Traditional approach

With jDocMunch

Find a configuration section

~12,000 tokens

~400 tokens

Browse documentation structure

~40,000 tokens

~800 tokens

Explore a full doc set

~100,000 tokens

~2,000 tokens

Index once. Query cheaply forever.
Precision context beats brute-force context.


jDocMunch MCP

AI-native documentation navigation for serious agents

License MCP Local-first jMRI DOI PyPI version PyPI - Python Version

Commercial licenses

jDocMunch-MCP is free for non-commercial use.

Commercial use requires a paid license.

jDocMunch-only licenses

Want both code and docs retrieval?

1.x compatibility commitment

Every 1.x license entitles you to every future 1.x release. We will never ship a 1.x version that:

  • removes or renames an MCP tool (deprecated tool names keep their aliases),

  • drops a Section field from the response shape,

  • forces a reindex without auto-migrating your existing index on first load,

  • changes the JSON wire format of any tool response in a way that breaks an existing consumer,

  • or makes a previously-default behavior raise.

Anything that would require breaking these promises is reserved for a future major version (2.x). The full machine-checked contract is enforced via tests/test_server.py (tool-name and required-field invariants) and the replay-fixture gate that runs on every release.

Stop dumping documentation files into context windows. Start navigating docs structurally.

jDocMunch indexes documentation once by heading hierarchy and section structure, then gives MCP-compatible agents precise access to the explanations they actually need instead of forcing them to brute-read files.

It is built for workflows where token efficiency, context hygiene, and agent reliability matter.


Why this exists

Large context windows do not fix bad retrieval.

Agents waste money and reasoning bandwidth when they:

  • open entire documents to find one configuration block

  • repeatedly re-read headings, boilerplate, and unrelated sections

  • lose important explanations inside oversized context payloads

  • consume documentation as flat text instead of structured knowledge

jDocMunch fixes that by changing the unit of access from file to section.

Instead of handing an agent an entire document, it can retrieve exactly:

  • an installation section

  • a configuration section

  • an API explanation

  • a troubleshooting section

  • a specific subtree of related headings

That makes documentation exploration cheaper, faster, and more stable.


What makes it different

Section-first retrieval

Search and retrieve documentation by section, not just file path or keyword match.

Byte-precise extraction

Full content is pulled on demand from exact byte offsets into the original file.

Stable section IDs

Sections retain durable identities across re-indexing when path, heading text, and heading level remain unchanged.

Local-first architecture

Indexes and raw docs are stored locally. No hosted dependency required.

MCP-native workflow

Works with Claude Desktop, Claude Code, Google Antigravity, and other MCP-compatible clients.


What gets indexed

Every section stores:

  • title and heading level

  • one-line summary

  • extracted tags and references

  • SHA-256 content hash for drift detection

  • byte offsets into the original file

This allows agents to discover documentation structurally, then request only the specific section they need.


Why agents need this

Traditional doc retrieval methods all break in different ways:

  • File scanning loads far too much irrelevant text

  • Keyword search finds terms but often loses context

  • Chunking breaks authored hierarchy and separates explanations from examples

jDocMunch preserves the structure the human author intended:

  • heading hierarchy

  • parent/child relationships

  • section boundaries

  • coherent explanatory units

Agents do not need bigger context windows.
They need better navigation.


How it works

jDocMunch implements jMRI-Full — the open specification for structured retrieval MCP servers. jMRI-Full covers the full stack: discover, search, retrieve, and metadata operations with batch retrieval, hash-based drift detection, byte-offset addressing, and a complete _meta envelope on every call.

  1. Discovery GitHub API or local directory walk

  2. Security filtering Traversal protection, secret exclusion, binary detection

  3. Parsing Format-aware section splitting: heading-based (Markdown/MDX/HTML/RST/AsciiDoc), structure-based (OpenAPI tags, JSON keys, XML elements), or cell-based (Jupyter)

  4. Hierarchy wiring Parent/child relationships established

  5. Summarization Heading text → AI batch summaries → title fallback

  6. Storage JSON index + raw files stored locally under ~/.doc-index/

  7. Retrieval O(1) byte-offset seeking via stable section IDs


Stable section IDs

{repo}::{doc_path}::{ancestor-chain/slug}#{level}

The slug is prefixed with the ancestor heading chain, making IDs both readable and stable. A new heading inserted in one branch of a document never renumbers IDs in another branch.

Examples:

  • owner/repo::docs/install.md::installation#1

  • owner/repo::docs/install.md::installation/prerequisites#3

  • owner/repo::README.md::usage/configuration/advanced-configuration#4

  • local/myproject::guide.md::configuration#2

IDs remain stable across re-indexing when the file path, heading text, heading level, and parent heading chain do not change.


Installation

Prerequisites

  • Python 3.10+

  • pip

Install

pip install jdocmunch-mcp

Verify:

jdocmunch-mcp --help

Configure an MCP client

PATH note: MCP clients often run with a restricted environment where jdocmunch-mcp may not be found even if it works in your shell. Using uvx is the recommended approach because it resolves the package on demand without relying on your system PATH. If you prefer pip install, use the absolute path to the executable instead.

Common executable paths

  • Linux: /home/<username>/.local/bin/jdocmunch-mcp

  • macOS: /Users/<username>/.local/bin/jdocmunch-mcp

  • Windows: C:\\Users\\<username>\\AppData\\Roaming\\Python\\Python3xx\\Scripts\\jdocmunch-mcp.exe


Claude Desktop / Claude Code

Config file location:

OS

Path

macOS

~/Library/Application Support/Claude/claude_desktop_config.json

Linux

~/.config/claude/claude_desktop_config.json

Windows

%APPDATA%\Claude\claude_desktop_config.json

Minimal config

{
  "mcpServers": {
    "jdocmunch": {
      "command": "uvx",
      "args": ["jdocmunch-mcp"]
    }
  }
}

With optional AI summaries and GitHub auth

{
  "mcpServers": {
    "jdocmunch": {
      "command": "uvx",
      "args": ["jdocmunch-mcp"],
      "env": {
        "GITHUB_TOKEN": "ghp_...",
        "ANTHROPIC_API_KEY": "sk-ant-..."
      }
    }
  }
}

For Anthropic or Gemini, the base uvx jdocmunch-mcp command is enough once the corresponding API key is present. For OpenAI-compatible providers such as OpenAI, MiniMax, or GLM-5, include the optional dependency in the launcher command:

{
  "mcpServers": {
    "jdocmunch": {
      "command": "uvx",
      "args": ["--with", "openai", "jdocmunch-mcp"],
      "env": {
        "MINIMAX_API_KEY": "mx-...",
        "JDOCMUNCH_SUMMARIZER_PROVIDER": "minimax"
      }
    }
  }
}

After saving the config, restart Claude Desktop / Claude Code.

jDocMunch ships enforcement hooks that keep your agent honest:

  • PreToolUse — warns when Claude tries to Read a large doc file, suggesting search_sections + get_section

  • PostToolUse — auto-reindexes doc files after Edit/Write so the index never goes stale

  • PreCompact — injects a session snapshot before context compaction so doc orientation survives

Install everything in one command:

jdocmunch-mcp init

This detects your MCP clients, patches their config, installs a Doc Exploration Policy into CLAUDE.md, sets up enforcement hooks, and indexes your current directory. Use --dry-run to preview, --demo for a benefit summary, or --yes for non-interactive mode.

For hooks only:

jdocmunch-mcp init --hooks

If you also use jCodeMunch, run both:

jcodemunch-mcp init
jdocmunch-mcp init

CLI subcommands

Subcommand

Purpose

serve (default)

Run the MCP server (stdio)

init

One-command onboarding: detect clients, write config, install policy, hooks, index

claude-md

Print or install the Doc Exploration Policy (--install global|project)

index-local --path <dir>

Index a local folder (CLI, no MCP session needed)

index-file <path>

Re-index a single file within an existing index

hook-pretooluse

PreToolUse hook handler (reads JSON from stdin)

hook-posttooluse

PostToolUse hook handler (reads JSON from stdin)

hook-precompact

PreCompact hook handler (reads JSON from stdin)


Google Antigravity

  1. Open the Agent pane

  2. Click the menu → MCP ServersManage MCP Servers

  3. Click View raw config to open mcp_config.json

  4. Add the entry below, save, then restart the MCP server

{
  "mcpServers": {
    "jdocmunch": {
      "command": "uvx",
      "args": ["jdocmunch-mcp"]
    }
  }
}

OpenClaw

Option A — CLI (one command):

openclaw mcp set jdocmunch '{"command":"uvx","args":["jdocmunch-mcp"]}'

Option B — Edit config directly:

Add the entry to ~/.openclaw/openclaw.json under mcpServers:

{
  "mcpServers": {
    "jdocmunch": {
      "command": "uvx",
      "args": ["jdocmunch-mcp"],
      "transport": "stdio"
    }
  }
}

With optional AI summaries:

{
  "mcpServers": {
    "jdocmunch": {
      "command": "uvx",
      "args": ["jdocmunch-mcp"],
      "transport": "stdio",
      "env": {
        "ANTHROPIC_API_KEY": "${ANTHROPIC_API_KEY}"
      }
    }
  }
}

Restart the gateway and verify:

openclaw gateway restart
openclaw mcp list

Per-agent routing (optional):

{
  "agents": {
    "researcher": {
      "mcpServers": ["jdocmunch", "brave-search", "fetch"]
    }
  }
}

Tell your OpenClaw agent to use it

Without explicit instructions, your agent will ignore jDocMunch even though it's connected. Create a system prompt file (e.g. ~/.openclaw/agents/researcher.md) with:

## Documentation Policy
Always use jDocMunch-MCP tools for documentation exploration.
- Before reading a doc file: use search_sections or get_toc
- To retrieve specific content: use get_section with the section ID
- To index local docs: use index_local with the docs folder path
- Never open documentation files directly — navigate by section.

Point your agent at it in ~/.openclaw/openclaw.json:

{
  "agents": {
    "named": {
      "researcher": {
        "systemPromptFile": "~/.openclaw/agents/researcher.md"
      }
    }
  }
}

Usage examples

index_local:          { "path": "/path/to/docs" }
index_repo:           { "url": "owner/repo" }

get_toc:              { "repo": "owner/repo" }
get_toc_tree:         { "repo": "owner/repo" }
get_document_outline: { "repo": "owner/repo", "doc_path": "docs/config.md" }
search_sections:      { "repo": "owner/repo", "query": "authentication" }
get_section:          { "repo": "owner/repo", "section_id": "owner/repo::docs/config.md::authentication#1" }

Tool surface

Tool

Purpose

index_local

Index a local documentation folder

index_repo

Index a GitHub repository’s docs

list_repos

List indexed documentation sets

get_toc

Flat section list in document order

get_toc_tree

Nested section tree per document

get_document_outline

Section hierarchy for one document

search_sections

Weighted search returning summaries only

get_section

Full content of one section

get_sections

Batch content retrieval

get_section_context

Section + ancestor headings + child summaries

delete_index

Remove a doc index

get_broken_links

Detect internal links/anchors that no longer resolve

get_doc_coverage

Which jcodemunch symbols have matching doc sections

Search and retrieval tools include a _meta envelope with timing, token savings, and cost avoided.

Example:

"_meta": {
  "latency_ms": 12,
  "sections_returned": 5,
  "tokens_saved": 1840,
  "total_tokens_saved": 94320,
  "cost_avoided": { "claude_opus": 0.0276, "gpt5_latest": 0.0184 },
  "total_cost_avoided": { "claude_opus": 1.4148, "gpt5_latest": 0.9432 }
}

total_tokens_saved and total_cost_avoided accumulate across tool calls and persist to ~/.doc-index/_savings.json.

Check your token savings

Every jDocMunch tool response includes a _meta block with tokens_saved (this call) and total_tokens_saved (lifetime). To check your cumulative savings, ask your agent to call any jDocMunch tool (e.g. get_toc or search_sections) and look at the _meta envelope. Lifetime stats persist in ~/.doc-index/_savings.json across sessions.


Supported formats

Format

Extensions

Notes

Markdown

.md, .markdown

ATX (# Heading) and setext headings

MDX

.mdx

JSX tags, frontmatter, import/export stripped before parsing

Plain text

.txt

Paragraph-block section splitting

reStructuredText

.rst

Adornment-based heading detection

AsciiDoc

.adoc

= and == heading hierarchy

Jupyter Notebook

.ipynb

Markdown cells used as sections; code cells attached as content

HTML

.html

<h1><h6> headings; boilerplate stripped

OpenAPI / Swagger

.yaml, .yml, .json, .jsonc

OpenAPI 3.x and Swagger 2.x; operations grouped by tag as sections

JSON / JSONC

.json, .jsonc

Top-level keys as sections; JSONC comments stripped before parsing

XML / SVG / XHTML

.xml, .svg, .xhtml

Element hierarchy used for section structure

See ARCHITECTURE.md for parser details.


Security

Built-in protections include:

  • path traversal prevention

  • symlink escape protection

  • secret file exclusion (.env, *.pem, and similar)

  • binary file detection

  • configurable file size limits

  • storage path injection prevention via _safe_content_path()

  • atomic index writes

See SECURITY.md for details.


Best use cases

  • agent-driven documentation exploration

  • finding configuration and API reference sections

  • onboarding to unfamiliar frameworks

  • token-efficient multi-agent documentation workflows

  • large documentation sets with dozens of files


Not intended for

  • source code symbol indexing (use jCodeMunch for that)

  • real-time file watching

  • cross-repository global search

  • semantic/vector similarity search as a standalone product (hybrid BM25 + semantic fusion is supported when embeddings are enabled — defaults to "auto", on whenever a provider is configured — but the core workflow remains structure-first)


Environment variables

Variable

Purpose

Required

GITHUB_TOKEN

GitHub API auth

No

ANTHROPIC_API_KEY

Section summaries via Claude Haiku

No

GOOGLE_API_KEY

Section summaries via Gemini Flash; also Gemini embeddings

No

OPENAI_API_KEY

OpenAI embeddings (text-embedding-3-small)

No

JDOCMUNCH_EMBEDDING_PROVIDER

Force provider: gemini, openai, openai-compatible, sentence-transformers, none

No

JDOCMUNCH_OPENAI_COMPAT_URL

Endpoint URL for openai-compatible embeddings

No

JDOCMUNCH_OPENAI_COMPAT_MODEL

Model for openai-compatible embeddings

No

JDOCMUNCH_OPENAI_COMPAT_API_KEY

Dedicated optional API key for openai-compatible embeddings

No

JDOCMUNCH_OPENAI_COMPAT_BATCH_SIZE

Batch size for openai-compatible embeddings (default: 32)

No

JDOCMUNCH_ST_MODEL

sentence-transformers model (default: all-MiniLM-L6-v2)

No

DOC_INDEX_PATH

Custom cache path

No

JDOCMUNCH_SHARE_SAVINGS

Set to 0 to disable anonymous community token savings reporting

No


Community savings meter

Each tool call can contribute an anonymous delta to a live global counter at j.gravelle.us. Only two values are sent:

  • tokens saved

  • a random anonymous install ID

No content, file paths, repo names, or identifying material are sent.

The anonymous install ID is generated once and stored in ~/.doc-index/_savings.json.

To disable reporting, set:

JDOCMUNCH_SHARE_SAVINGS=0

Contributing

PRs welcome! All contributors must sign the Contributor License Agreement before their PR can be merged — CLA Assistant will prompt you automatically. See CONTRIBUTING.md for details.


Documentation


License (dual use)

This repository is free for non-commercial use under the terms below. Commercial use requires a paid commercial license.


Works with

jDocMunch plugs into any MCP-compatible agent or IDE. Tested configurations:

Platform

Config

Claude Code / Claude Desktop

jdocmunch-mcp init (auto-detects and patches config)

Cursor / Windsurf

jdocmunch-mcp init or manual mcp.json

Hermes Agent

Add to ~/.hermes/config.yaml — see skill

Any MCP client

stdio: jdocmunch-mcp

# ~/.hermes/config.yaml
mcp_servers:
  jdocmunch:
    command: "uvx"
    args: ["jdocmunch-mcp"]

Star History


Copyright (c) 2026 J. Gravelle

1. Non-commercial license grant (free)

Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the “Software”), to use, copy, modify, merge, publish, and distribute the Software for personal, educational, research, hobby, or other non-commercial purposes, subject to the following conditions:

  1. The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.

  2. Any modifications made to the Software must clearly indicate that they are derived from the original work, and the name of the original author (J. Gravelle) must remain intact. He's kinda full of himself.

  3. Redistributions of the Software in source code form must include a prominent notice describing any modifications from the original version.

2. Commercial use

Commercial use of the Software requires a separate paid commercial license from the author.

“Commercial use” includes, but is not limited to:

  • use of the Software in a business environment

  • internal use within a for-profit organization

  • incorporation into a product or service offered for sale

  • use in connection with revenue generation, consulting, SaaS, hosting, or fee-based services

For commercial licensing inquiries: j@gravelle.us https://j.gravelle.us

Until a commercial license is obtained, commercial use is not permitted.

3. Disclaimer of warranty

THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, AND NONINFRINGEMENT.

IN NO EVENT SHALL THE AUTHOR OR COPYRIGHT HOLDER BE LIABLE FOR ANY CLAIM, DAMAGES, OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT, OR OTHERWISE, ARISING FROM, OUT OF, OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

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