A
licenseA
qualityC
maintenanceAn MCP server that queries 19 package registries (npm, PyPI, crates.io, etc.) to retrieve the latest version of packages and their metadata.
21
1
MIT
Best Nextflow MCP Servers
Nextflow is a bioinformatics workflow management system that enables scalable and reproducible scientific workflows using software containers.
Why this server?
Queries Nextflow for the latest version of pipelines.
Why this server?
Enables execution of bioinformatics pipelines using Nextflow as the workflow backend, providing reproducible run management and verifiable provenance.
AlicenseAqualityAmaintenanceEnables AI assistants to run reproducible bioinformatics pipelines over MCP, with verifiable provenance via checksums and Workflow Run RO-Crate metadata.61MITWhy this server?
Analyzes Nextflow pipelines, building a graph of processes and their input/output files for navigable data-flow dependencies.
AlicenseNot gradedqualityBmaintenanceA high-performance, polyglot code-analysis graph for coding agents that enables cross-language and cross-process code relationship queries in sub-millisecond time.MITWhy this server?
Provides a comprehensive suite of development tools for Nextflow, including building from source, running tests (integration and plugin tests), executing development versions, managing development directories, and accessing documentation.
FlicenseNot gradedqualityDmaintenanceA Model Context Protocol server designed to facilitate Nextflow development and testing, providing tools for building from source, running tests, and managing the Nextflow development environment.2