UCSC Genome Browser MCP Server
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Alternatives to UCSC Genome Browser MCP Server
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Related Servers
- AlicenseNot gradedqualityCmaintenanceEnables querying UCSC Genome Browser assemblies, annotation tracks, track data over genomic intervals, and raw DNA sequences across ~250 species without authentication.70 npmMIT
- AlicenseBqualityDmaintenanceProvides a programmatic interface to the Genome Aggregation Database (gnomAD) API across versions v2.1.1, v3.1.2, and v4.1.0. It enables users to query gene metadata, variant information, population frequencies, and ClinVar data through a unified schema.126Apache 2.0
- AlicenseBqualityDmaintenanceProvides access to the Ensembl genomics REST API with 30+ tools for genomic data including gene lookup, sequence retrieval, genetic variants, cross-species homology, phenotypes, and regulatory features.25561 npmISC
- AlicenseNot gradedqualityCmaintenanceEnables querying dbSNP refSNP records and converting between HGVS, SPDI, and rsID identifiers for human genetic variants, with assembly-aware genomic placement and population frequencies.63 npmMIT
- FlicenseNot gradedqualityDmaintenanceProvides comprehensive access to the NCBI Datasets API, enabling genomic, taxonomic, and biological data operations through 31 specialized tools.16-
- AlicenseNot gradedqualityDmaintenanceProvides access to BioThings.io APIs for comprehensive gene and variant annotations, enabling seamless integration of biological data into workflows.2,448 npm6MIT
TDQS
Scored across 12 tools
Most tools have distinct purposes, but there is some overlap between 'find_genome' and 'search_genome'—both involve searching genomes, which could cause confusion. The other tools target specific resources like sequences, tracks, chromosomes, files, and hubs with clear boundaries.
All tool names follow a consistent verb_noun pattern using snake_case, such as 'find_genome', 'get_sequence', and 'list_tracks'. This predictability makes it easy for agents to understand and use the toolset without confusion.
With 12 tools, the count is well-suited for the UCSC Genome Browser domain, covering key operations like searching, retrieving data, and listing resources. Each tool serves a specific function without redundancy, making the set comprehensive yet manageable.
The toolset provides strong coverage for browsing and retrieving genomic data, including search, sequence access, track management, and hub listings. A minor gap is the lack of tools for modifying or updating data, but this aligns with the server's likely read-only focus on the UCSC Browser.