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    • A
      license
      A
      quality
      A
      maintenance
      A high-performance MCP server that gives LLMs access to 25 biomedical tools federated across 50+ upstream APIs for genes, variants, drugs, diseases, literature, clinical trials, and structural biology.
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      Apache 2.0
    • F
      license
      B
      quality
      A
      maintenance
      BioMCP is an open-source MCP server that connects any AI assistant to 15 open bioinformatics databases with zero configuration. It provides 23 tools for literature, sequences, BLAST, structures, enrichment, annotations, genomes, interactions, variants, domains, compounds, and single-cell data.
      73
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    • A
      license
      B
      quality
      D
      maintenance
      This MCP server provides 16 intelligent tools for searching, retrieving, and linking biomedical literature from PubMed and PMC. It enables LLM applications to perform complex queries, batch processing, and cross-database linking.
      16
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      MIT
    • A
      license
      A
      quality
      A
      maintenance
      An MCP server that gives AI assistants access to biological and biomedical RDF databases via SPARQL at the RDF Portal, as well as selected REST APIs (NCBI E-utilities, UniProt, ChEMBL, PDB, Reactome, Rhea, MeSH, and more).
      29
      13
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    • A
      license
      Not graded
      quality
      A
      maintenance
      Federates 13 gene-related MCP backends (gnomAD, GTEx, etc.) behind a single Streamable HTTP endpoint with collision-free namespacing and search-based tool discovery.
      5
      MIT