ensembl_regulatory
Retrieve regulatory features, binding matrices, and annotations from Ensembl genomic data to analyze gene regulation mechanisms.
Instructions
Get regulatory features, binding matrices, and regulatory annotations. Covers regulatory overlap endpoints and binding matrix data.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| region | No | Genomic region in format 'chromosome:start-end' (e.g., '17:7565096-7590856', 'X:1000000-2000000', '6:25000000-35000000') | |
| protein_id | No | Protein ID for regulatory features affecting translation (e.g., 'ENSP00000288602', 'ENSP00000350283') | |
| binding_matrix_id | No | Binding matrix stable ID (e.g., 'ENSPFM0001', 'ENSPFM0123') | |
| species | No | Species name (e.g., 'homo_sapiens', 'mus_musculus') | homo_sapiens |
| feature_type | No | Type of regulatory feature (e.g., 'RegulatoryFeature', 'MotifFeature', 'TF_binding_site') |