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get_compound_attributes_from_pubchem

Retrieve compound attributes from PubChem RDF by providing a PubChem Compound ID (CID). Returns data as JSON; check for error prefix on failure.

Instructions

Get compound attributes from PubChem RDF.

RETURNS the compound attributes as a JSON-formatted string. On upstream/HTTP failure this tool does NOT raise — it returns a plain string beginning with "Error:" (not JSON). CHECK FOR the "Error:" prefix BEFORE parsing.

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
pubchem_compound_idYesPubChem Compound ID (CID), e.g. "445154".

Output Schema

TableJSON Schema
NameRequiredDescriptionDefault
resultYes
Behavior4/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

No annotations are provided, so the description carries the full burden. It discloses that on failure it returns a plain string with 'Error:' prefix instead of raising an exception, and that it returns JSON on success. This goes beyond basic functionality.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

Two sentences, front-loaded with purpose and then error behavior. Every sentence adds value without redundancy.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness5/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

With only one parameter, an output schema present, and clear error handling, the description covers all necessary context for an agent to use the tool correctly.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema coverage is 100% with a well-described 'pubchem_compound_id' parameter. The description does not add extra parameter details beyond the schema, so baseline score of 3 is appropriate.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states 'Get compound attributes from PubChem RDF,' specifying a verb and resource. It distinguishes from siblings like 'get_pubchem_compound_id' which likely returns only the ID, and other search tools.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines4/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The description provides explicit guidance: it retrieves compound attributes and warns about error handling. However, it does not explicitly mention when not to use it or suggest alternatives.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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