BioHarbor
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TDQS
Scored across 12 tools
Each tool targets a distinct operation: sequence statistics, translation, ORF finding, homology search, structure prediction, and job management are clearly separated. No overlapping purposes; get_job, list_jobs, and cancel_job are distinct job operations.
Names uniformly use snake_case and mostly follow a verb_noun pattern (e.g., translate_sequence, find_orfs, get_job). Minor deviation: seq_stats and gpu_status are noun phrases, but overall consistent and readable.
12 tools is well within the ideal 3-15 range, each tool serves a clear purpose in the bioinformatics workflow without redundancy. The set is well-scoped for the domain.
Covers a sequence analysis pipeline from validation to structure prediction, with job management and resource introspection. Minor gap: no explicit tool for retrieving or loading input sequences (e.g., from files or databases), though read_file exists for outputs.