Skip to main content
Glama

Related Servers

Alternatives to lineageverse-mcp

No user-submitted related servers found.

    Related Servers

    • A
      license
      Not graded
      quality
      C
      maintenance
      An MCP server that enables scRNA-Seq analysis through natural language, providing tools for data preprocessing, clustering, and biological visualization. It supports both predefined function execution and a flexible code mode powered by a Jupyter backend for automated single-cell transcriptomics workflows.
      16
      BSD 3-Clause
    • A
      license
      C
      quality
      C
      maintenance
      An MCP server that enables single-cell RNA sequencing analysis through natural language, supporting data processing, visualization, and analysis tasks without requiring coding knowledge.
      52
      12
      BSD 3-Clause
    • F
      license
      B
      quality
      A
      maintenance
      BioMCP is an open-source MCP server that connects any AI assistant to 15 open bioinformatics databases with zero configuration. It provides 23 tools for literature, sequences, BLAST, structures, enrichment, annotations, genomes, interactions, variants, domains, compounds, and single-cell data.
      73
      9
      -
    • F
      license
      Not graded
      quality
      C
      maintenance
      Enables evidence-traceable annotation of human and mouse single-cell data by resolving ontology terms, searching versioned marker and reference-atlas indexes, ranking and auditing candidate cell types, and exporting sealed decision bundles with provenance.
      1
      -
    • A
      license
      A
      quality
      C
      maintenance
      An MCP server for searching and accessing RNA sequencing datasets from the European Nucleotide Archive (ENA), supporting bulk, single-cell, and spatial transcriptomics with advanced filtering and download capabilities.
      11
      1
      Apache 2.0

    TDQS

    A3.8/5.0

    Scored across 18 tools

    Disambiguation5/5

    Each tool targets a distinct operation in the lineage tracing pipeline: data import, simulation, reconstruction, analysis, and visualization. No two tools have overlapping functionality that would cause confusion.

    Naming Consistency4/5

    Most tools follow a verb_noun pattern (e.g., simulate_tree, plot_tree, load_dataset). However, 'dataset_info' deviates as noun_noun, and 'label_clades' is verb_noun but could be better as 'label_clades' is fine. Overall consistency is high with minor exceptions.

    Tool Count5/5

    18 tools cover the full workflow of lineage tracing without being excessive. Each tool has a clear purpose, and the count is appropriate for the domain's complexity.

    Completeness5/5

    The toolset provides a complete pipeline: import, simulate, reconstruct, analyze (parsimony, heritability, distances), visualize, and manage datasets. No obvious gaps for the intended use case.

    Maintenance

    ActivityStale
    ResponsivenessNo issues