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RCSB PDB MCP Server

by cnyambura
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Python

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    TDQS

    A4/5.0

    Scored across 5 tools

    Disambiguation5/5

    Each tool has a clearly distinct purpose: retrieving entries, polymer entities, downloading files, querying the API, and searching by organism. No overlaps in functionality.

    Naming Consistency4/5

    Tool names follow a predictable pattern with 'get_' for retrieval and descriptive verbs like 'download' and 'query'. Minor inconsistency with 'search_pdb_by_organism' using a different verb, but overall consistent.

    Tool Count5/5

    Five tools is well-scoped for an RCSB PDB server, covering the essential operations without unnecessary bloat or excessive granularity.

    Completeness4/5

    The set covers entry retrieval, entity retrieval, file downloads, and raw API access. The 'search_pdb_by_organism' tool only provides guidance rather than performing actual searches, but the 'query_rcsb_api' tool can be used for that purpose, so no major gaps.

    Maintenance

    ActivityInactive
    ResponsivenessNo issues

    Resources