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nucleotide_archive_mcp

by biocontext-ai
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Python
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    TDQS

    A4.3/5.0

    Scored across 11 tools

    Disambiguation4/5

    Tools are mostly distinct, with some overlap between metadata retrieval tools like get_available_fields and list_library_types, and between get_study_details and get_study_publications. However, clear descriptions clarify when to use each, reducing ambiguity.

    Naming Consistency5/5

    All tool names follow a consistent verb_noun pattern in snake_case (e.g., search_rna_studies, get_study_details). Deviations like find_studies_by_publication still follow a predictable verb_noun_by_phrase structure.

    Tool Count5/5

    With 11 tools, the set is well-scoped for accessing the European Nucleotide Archive. Each tool serves a distinct purpose in the workflow: discovery, search, metadata retrieval, and download.

    Completeness4/5

    The tools cover the essential workflow from discovery to download. Minor gaps exist, such as the absence of direct date-based search and the find_studies_by_publication tool being a documented dead end, but these are acceptable for a read-only archive interface.

    Maintenance

    ActivityInactive
    ResponsivenessNo issues

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