Bio-MCP FastQC Server
Officialby bio-mcp
Server Configuration
Describes the environment variables required to run the server.
| Name | Required | Description | Default |
|---|---|---|---|
| BIO_MCP_TIMEOUT | No | Command timeout in seconds (default: 1800) | 1800 |
| BIO_MCP_TEMP_DIR | No | Temporary directory for processing | |
| BIO_MCP_QUEUE_URL | No | URL for the queue API (e.g., http://queue-api:8000) used for async processing for large datasets | |
| BIO_MCP_FASTQC_PATH | No | Path to FastQC executable (default: "fastqc") | fastqc |
| BIO_MCP_MULTIQC_PATH | No | Path to MultiQC executable (default: "multiqc") | multiqc |
| BIO_MCP_MAX_FILE_SIZE | No | Maximum file size in bytes (default: 10GB) | 10GB |
Instructions
Guidance the server publishes about itself, which clients place ahead of the tool catalog so the model reads it before choosing anything.
This server publishes no instructions, or was last inspected before Glama recorded them.
Capabilities
Server capabilities have not been inspected yet.
Tools
Functions exposed to the LLM to take actions
| Name | Description |
|---|---|
No tools | |
Prompts
Interactive templates invoked by user choice
| Name | Description |
|---|---|
No prompts | |
Resources
Contextual data attached and managed by the client
| Name | Description |
|---|---|
No resources | |
This server cannot be deployed
Maintenance
ActivityInactive
ResponsivenessNo issues