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encode-toolkit

by ammawla
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Python
Hybrid

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    TDQS

    A4.5/5.0

    Scored across 20 tools

    Disambiguation5/5

    Each tool has a clearly distinct purpose: searching experiments vs. files, downloading batches vs. specific files, tracking vs. comparing, etc. No two tools perform overlapping functions, and descriptions clearly differentiate them.

    Naming Consistency5/5

    All 20 tools follow a consistent 'encode_verb_noun' pattern in snake_case. Verbs like get, list, search, track, compare are used uniformly, making the tool surface predictable and easy to navigate.

    Tool Count5/5

    20 tools is well-suited for the ENCODE domain, covering discovery, retrieval, tracking, comparison, citations, provenance, and credentials. Each tool earns its place without being overwhelming.

    Completeness5/5

    The toolkit covers the full lifecycle: data exploration (search, facets, metadata), retrieval (download, batch download), local management (track, list, export, summarize), comparison, citations, references, provenance tracking, and credentials. There are no obvious gaps for a comprehensive ENCODE workflow.

    Maintenance

    ActivityStale
    ResponsivenessWithin a week

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