Skip to main content
Glama
afrise

Academic Paper Search MCP Server

by afrise

Academic Paper Search MCP Server

A Model Context Protocol (MCP) server that enables searching and retrieving academic paper information from multiple sources.

The server provides LLMs with:

  • Real-time academic paper search functionality

  • Access to paper metadata and abstracts

  • Ability to retrieve full-text content when available

  • Structured data responses following the MCP specification

While primarily designed for integration with Anthropic's Claude Desktop client, the MCP specification allows for potential compatibility with other AI models and clients that support tool/function calling capabilities (e.g. OpenAI's API).

Note: This software is under active development. Features and functionality are subject to change.

Features

This server exposes the following tools:

  • search_papers: Search for academic papers across multiple sources

    • Parameters:

      • query (str): Search query text

      • limit (int, optional): Maximum number of results to return (default: 10)

    • Returns: Formatted string containing paper details

  • fetch_paper_details: Retrieve detailed information for a specific paper

    • Parameters:

      • paper_id (str): Paper identifier (DOI or Semantic Scholar ID)

      • source (str, optional): Data source ("crossref" or "semantic_scholar", default: "crossref")

    • Returns: Formatted string with comprehensive paper metadata including:

      • Title, authors, year, DOI

      • Venue, open access status, PDF URL (Semantic Scholar only)

      • Abstract and TL;DR summary (when available)

  • search_by_topic: Search for papers by topic with optional date range filter

    • Parameters:

      • topic (str): Search query text (limited to 300 characters)

      • year_start (int, optional): Start year for date range

      • year_end (int, optional): End year for date range

      • limit (int, optional): Maximum number of results to return (default: 10)

    • Returns: Formatted string containing search results including:

      • Paper titles, authors, and years

      • Abstracts and TL;DR summaries when available

      • Venue and open access information

Related MCP server: Research MCP

Setup

Installing via Smithery

To install Academic Paper Search Server for Claude Desktop automatically via Smithery:

npx -y @smithery/cli install @afrise/academic-search-mcp-server --client claude

note this method is largely untested, as their server seems to be having trouble. you can follow the standalone instructions until smithery gets fixed.

Installing via uv (manual install):

  1. Install dependencies:

uv add "mcp[cli]" httpx
  1. Set up required API keys in your environment or .env file:

#  These are not actually implemented
SEMANTIC_SCHOLAR_API_KEY=your_key_here 
CROSSREF_API_KEY=your_key_here  # Optional but recommended
  1. Run the server:

uv run server.py

Usage with Claude Desktop

  1. Add the server to your Claude Desktop configuration (claude_desktop_config.json):

{
  "mcpServers": {
    "academic-search": {
      "command": "uv",
      "args": ["run ", "/path/to/server/server.py"],
      "env": {
        "SEMANTIC_SCHOLAR_API_KEY": "your_key_here",
        "CROSSREF_API_KEY": "your_key_here"
      }
    }
  }
}
  1. Restart Claude Desktop

Development

This server is built using:

  • Python MCP SDK

  • FastMCP for simplified server implementation

  • httpx for API requests

API Sources

  • Semantic Scholar API

  • Crossref API

License

This project is licensed under the GNU Affero General Public License v3.0 (AGPL-3.0). This license ensures that:

  • You can freely use, modify, and distribute this software

  • Any modifications must be open-sourced under the same license

  • Anyone providing network services using this software must make the source code available

  • Commercial use is allowed, but the software and any derivatives must remain free and open source

See the LICENSE file for the full license text.

Contributing

Contributions are welcome! Here's how you can help:

  1. Fork the repository

  2. Create a feature branch (git checkout -b feature/amazing-feature)

  3. Commit your changes (git commit -m 'Add amazing feature')

  4. Push to the branch (git push origin feature/amazing-feature)

  5. Open a Pull Request

Please note:

  • Follow the existing code style and conventions

  • Add tests for any new functionality

  • Update documentation as needed

  • Ensure your changes respect the AGPL-3.0 license terms

By contributing to this project, you agree that your contributions will be licensed under the AGPL-3.0 license.

Available Tools

3 tools
fetch_paper_detailsB

Get detailed information about a specific paper.

Args:
    paper_id: Paper identifier (DOI for Crossref, paper ID for Semantic Scholar)
    source: Source database ("semantic_scholar" or "crossref")
ParametersJSON Schema
NameRequiredDescriptionDefault
paper_idYes
sourceNosemantic_scholar

TDQS

B3.4/5.0
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

No annotations are provided, so the description carries the full burden of behavioral disclosure. It states the tool 'Get[s] detailed information,' which implies a read-only operation, but it doesn't disclose any behavioral traits such as authentication needs, rate limits, error handling, or what 'detailed information' includes. This leaves significant gaps in understanding how the tool behaves beyond its basic purpose.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is appropriately sized and front-loaded, starting with a clear purpose statement followed by a concise 'Args' section that lists parameters with brief explanations. Every sentence earns its place by providing essential information without unnecessary details, making it efficient and easy to parse.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness3/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Given the tool's moderate complexity (2 parameters, no annotations, no output schema), the description is partially complete. It covers the purpose and parameters well, but it lacks information on behavioral aspects like what 'detailed information' entails, potential errors, or usage constraints. Without an output schema, the description should ideally hint at the return structure, but it doesn't, leaving some context gaps.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters4/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

The description adds meaningful semantics beyond the input schema, which has 0% description coverage. It explains that 'paper_id' is a 'Paper identifier (DOI for Crossref, paper ID for Semantic Scholar)' and 'source' is a 'Source database' with options 'semantic_scholar' or 'crossref'. This clarifies the purpose and format of the parameters, compensating well for the lack of schema descriptions.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the tool's purpose: 'Get detailed information about a specific paper.' This specifies the verb ('Get') and resource ('paper'), making it easy to understand what the tool does. However, it doesn't explicitly differentiate from sibling tools like 'search_by_topic' or 'search_papers', which likely return lists rather than details for a specific paper.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines3/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The description implies usage by specifying that it's for a 'specific paper' and lists the required 'paper_id' and optional 'source' parameters. This suggests it should be used when you have a known paper identifier, but it doesn't explicitly state when to use this tool versus the sibling search tools or provide any exclusions or alternatives.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

search_by_topicB

Search for papers by topic with optional date range.

Note: Query length is limited to 300 characters. Longer queries will be automatically truncated.

Args:
    topic (str): Search query (max 300 chars)
    year_start (int, optional): Start year for date range
    year_end (int, optional): End year for date range  
    limit (int, optional): Maximum number of results to return (default 10)
    
Returns:
    str: Formatted search results or error message
ParametersJSON Schema
NameRequiredDescriptionDefault
limitNo
topicYes
year_endNo
year_startNo

TDQS

B3.4/5.0
Behavior3/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

With no annotations provided, the description carries the full burden of behavioral disclosure. It adds useful context: the query length limit (300 characters with truncation) and the return type (formatted search results or error message). However, it lacks details on permissions, rate limits, error conditions beyond truncation, or pagination behavior, which are important for a search tool.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is appropriately sized and well-structured. It starts with a clear purpose statement, adds a critical behavioral note (query length limit), and then lists parameters and returns in a formatted way. Every sentence adds value without redundancy, making it easy for an agent to parse quickly.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness3/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Given the tool's moderate complexity (4 parameters, no output schema, no annotations), the description is partially complete. It covers parameters and basic behavior but lacks output details (e.g., result format beyond 'formatted'), error handling specifics, and differentiation from siblings. For a search tool, this leaves gaps in guiding the agent effectively.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters4/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

The description adds significant meaning beyond the input schema, which has 0% description coverage. It explains each parameter's purpose: 'topic' as the search query with a character limit, 'year_start' and 'year_end' for date range, and 'limit' for maximum results with a default. This compensates well for the schema's lack of descriptions, though it could note that year parameters are optional integers.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the tool's purpose: 'Search for papers by topic with optional date range.' It specifies the verb ('search'), resource ('papers'), and scope ('by topic with optional date range'), making the intent unambiguous. However, it doesn't explicitly differentiate from sibling tools like 'search_papers' or 'fetch_paper_details,' which would be needed for a perfect score.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The description provides no guidance on when to use this tool versus alternatives like 'search_papers' or 'fetch_paper_details.' It mentions optional parameters like date range and limit, but doesn't explain scenarios where this tool is preferred over siblings or any prerequisites for usage. This leaves the agent without context for tool selection.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

search_papersC

Search for papers across multiple sources.

args: 
    query: the search query
    limit: the maximum number of results to return (default 10)
ParametersJSON Schema
NameRequiredDescriptionDefault
limitNo
queryYes

TDQS

C2.7/5.0
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

With no annotations provided, the description carries the full burden of behavioral disclosure. It mentions searching 'across multiple sources' but does not cover critical aspects such as authentication needs, rate limits, pagination, or what the response format looks like. This leaves significant gaps in understanding the tool's behavior.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness3/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is brief and front-loaded with the main purpose, but the 'args' section is somewhat redundant as it repeats parameter names without adding new insights. It could be more structured to avoid duplication and enhance clarity.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness2/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Given the complexity of a search tool with no annotations and no output schema, the description is incomplete. It lacks details on result format, error handling, source specifics, and behavioral traits, making it inadequate for full contextual understanding.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters4/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

The description adds meaningful context for both parameters: 'query' is explained as 'the search query,' and 'limit' as 'the maximum number of results to return (default 10).' Since schema description coverage is 0%, this compensates well by clarifying parameter purposes beyond the bare schema.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose3/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description states the tool 'Search for papers across multiple sources,' which provides a clear verb ('Search') and resource ('papers'). However, it does not differentiate from sibling tools like 'search_by_topic' or specify what 'multiple sources' entails, making it somewhat vague in distinguishing its unique scope.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

No guidance is provided on when to use this tool versus alternatives like 'search_by_topic' or 'fetch_paper_details.' The description lacks context on scenarios, prerequisites, or exclusions, leaving usage decisions unclear.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

TDQS

C2.8/5.0
Disambiguation2/5

The tools 'search_by_topic' and 'search_papers' have significant overlap in purpose—both search for papers, with only minor differences in parameters. This creates ambiguity, as an agent might struggle to choose between them. The 'fetch_paper_details' tool is distinct, but the two search tools are not clearly differentiated.

Naming Consistency3/5

The naming is mixed: 'fetch_paper_details' uses a verb_noun pattern, while 'search_by_topic' and 'search_papers' use verb_preposition_noun and verb_noun styles, respectively. This inconsistency makes the set less predictable, though the names are still readable and descriptive.

Tool Count2/5

With only 3 tools, the server feels thin for an academic paper search domain. It lacks essential operations like filtering by author, journal, or citation count, and there's no update or delete functionality, which limits its utility for comprehensive paper management.

Completeness2/5

The tool surface is incomplete for academic paper search. It covers basic fetch and search operations but misses key features such as author-based searches, citation tracking, paper categorization, or integration with reference managers. This will likely cause agent failures in complex workflows.

Maintenance

ActivityInactive
ResponsivenessUnresponsive

Resources

Unclaimed servers have limited discoverability.

Looking for Admin?

If you are the server author, to access and configure the admin panel.

Related MCP Connectors

Related MCP Servers

  • F
    license
    Not graded
    quality
    D
    maintenance
    Enables AI assistants to search across multiple academic databases (PubMed, arXiv, bioRxiv, medRxiv, Semantic Scholar) through a unified interface. Supports advanced filtering, metadata retrieval, PDF downloads, and comprehensive research workflows with citation analysis.
    5
  • A
    license
    Not graded
    quality
    C
    maintenance
    Enables LLMs to search, analyze, and summarize academic research papers in real-time from arXiv, Semantic Scholar, and PubMed. Provides automatic deduplication, citation analysis, and BibTeX generation across multiple research databases.
    26
    MIT
  • A
    license
    Not graded
    quality
    D
    maintenance
    Enables searching and downloading academic papers from multiple sources including arXiv, PubMed, bioRxiv, Google Scholar, and Semantic Scholar. Provides standardized tools compatible with OpenAI Deep Research and ChatGPT connectors.
    14
    MIT
  • A
    license
    A
    quality
    D
    maintenance
    Enables retrieval of academic paper metadata, PDFs, full text, citations, and references by title via Semantic Scholar, arXiv, and other sources.
    6
    1
    MIT

Latest Blog Posts

MCP directory API

We provide all the information about MCP servers via our MCP API.

curl -X GET 'https://glama.ai/api/mcp/v1/servers/afrise/academic-search-mcp-server'

If you have feedback or need assistance with the MCP directory API, please join our Discord server