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BacDive MCP Server

by ZengZichao
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    Deploy Server
    One endpoint for every MCP toolRayrun runs every MCP server behind one URL and holds the credentials. Each call is decided per client, tool, and argument, then recorded.ray.runAd

    TDQS

    A3.7/5.0

    Scored across 10 tools

    Disambiguation4/5

    Most tools are cleanly separated by resource and access path (ID lookup vs name search vs browse). However, bacdive_search_strain (by scientific name) and bacdive_search_taxon (free-text) both return taxa lists and could be confused, and search_strain/search_16s/search_genome all take species/genus names, differing only in returned content. Descriptions mitigate this well enough that selection is usually clear.

    Naming Consistency5/5

    Every tool follows a consistent bacdive_ prefix plus verb_noun pattern (search_strain, get_strain_by_id, search_culture_medium, browse_taxa). The distinction between search_* and get_*_by_id is applied predictably across resources.

    Tool Count5/5

    Ten tools is well-scoped for a read-only microbial database covering strains, taxa, media, sequences, and connectivity. Each tool clearly earns its place with no redundancy.

    Completeness4/5

    Strong lifecycle coverage: search and ID-based retrieval for strains and media, sequence lookups, browsing, and a ping. Minor gap: there is a bacdive_get_strain_by_id and get_culture_medium_by_id but no get_taxon_by_id, so taxon IDs surfaced by browse/search cannot be directly dereferenced—though strain detail largely compensates.

    Maintenance

    ActivityMaintained
    ResponsivenessNo issues

    Resources