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BacDive MCP Server

BacDive MCP Server

by ZengZichao
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    One endpoint for every MCP toolRayrun runs every MCP server behind one URL and holds the credentials. Each call is decided per client, tool, and argument, then recorded.ray.runAd

    TDQS

    A3.7/5.0

    Scored across 10 tools

    Disambiguation4/5

    Most tools are cleanly separated by resource and access path (ID lookup vs name search vs browse). However, bacdive_search_strain (by scientific name) and bacdive_search_taxon (free-text) both return taxa lists and could be confused, and search_strain/search_16s/search_genome all take species/genus names, differing only in returned content. Descriptions mitigate this well enough that selection is usually clear.

    Naming Consistency5/5

    Every tool follows a consistent bacdive_ prefix plus verb_noun pattern (search_strain, get_strain_by_id, search_culture_medium, browse_taxa). The distinction between search_* and get_*_by_id is applied predictably across resources.

    Tool Count5/5

    Ten tools is well-scoped for a read-only microbial database covering strains, taxa, media, sequences, and connectivity. Each tool clearly earns its place with no redundancy.

    Completeness4/5

    Strong lifecycle coverage: search and ID-based retrieval for strains and media, sequence lookups, browsing, and a ping. Minor gap: there is a bacdive_get_strain_by_id and get_culture_medium_by_id but no get_taxon_by_id, so taxon IDs surfaced by browse/search cannot be directly dereferenced—though strain detail largely compensates.

    Maintenance

    ActivityMaintained
    ResponsivenessNo recent community issues

    Resources