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Genomic-Agent-Discovery

by Sigomi
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  • gnomAD MCP Server

    shukwong
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    Enables AI assistants to query genetic variant data, gene constraints, and population genetics information from the gnomAD (Genome Aggregation Database) through its GraphQL API. Supports searching for genes and variants, retrieving constraint scores, analyzing population frequencies, and accessing genomic coverage data.
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    Deploy Server
    One endpoint for every MCP toolRayrun runs every MCP server behind one URL and holds the credentials. Each call is decided per client, tool, and argument, then recorded.ray.runAd

    TDQS

    A3.9/5.0

    Scored across 24 tools

    Disambiguation5/5

    Each tool has a clearly distinct purpose: separate tools for querying different databases (ClinVar, CADD, AlphaMissense, etc.), communication tools, and pharmacogenomics. Overlap is minimal and well-handled.

    Naming Consistency4/5

    Tools follow a consistent verb_noun pattern, but there is a slight inconsistency between 'get_' (e.g., get_acmg_genes) and 'query_' (e.g., query_clinvar) for database lookups, though the distinction appears intentional.

    Tool Count3/5

    With 24 tools, the count is on the higher end of acceptable. While the domain requires many database queries, some tools could potentially be combined, but overall it remains manageable.

    Completeness4/5

    The tool set covers a wide range of genomic queries (multiple databases, pharmacogenomics, HPO, ACMG genes), agent coordination, and prioritization. Minor gaps exist (e.g., no variant annotation upload), but core workflows are well covered.

    Maintenance

    ActivityNo data
    ResponsivenessSyncing

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