Related Servers

No user-submitted related servers found.

Related Servers

• nucleotide_archive_mcp

  biocontext-ai

  A

  license

  A

  quality

  C

  maintenance

  An MCP server for searching and accessing RNA sequencing datasets from the European Nucleotide Archive (ENA), supporting bulk, single-cell, and spatial transcriptomics with advanced filtering and download capabilities.

  Updated 7 months ago (2026-02-27 16:28 UTC)

  11

  5,202 PyPI

  1

  Apache 2.0

• microbe-mcp

  Presisitence

  A

  license

  -Not graded

  quality

  C

  maintenance

  An MCP server that wraps R scripts for microbiome and amplicon (16S/ITS) analysis, providing tools for alpha/beta diversity, differential abundance, networks, and more, with PNG/PDF outputs.

  Updated a month ago (2026-08-19 13:55 UTC)

  MIT

• SCMCP

  huang-sh

  A

  license

  C

  quality

  C

  maintenance

  An MCP server that enables single-cell RNA sequencing analysis through natural language, supporting data processing, visualization, and analysis tasks without requiring coding knowledge.

  Updated a year ago (2025-05-15 11:48 UTC)

  52

  12

  BSD 3-Clause

• SCMCP

  scmcphub

  A

  license

  -Not graded

  quality

  C

  maintenance

  An MCP server that enables scRNA-Seq analysis through natural language, providing tools for data preprocessing, clustering, and biological visualization. It supports both predefined function execution and a flexible code mode powered by a Jupyter backend for automated single-cell transcriptomics workflows.

  Updated a year ago (2025-07-10 16:43 UTC)

  16

  BSD 3-Clause

• BioQC-MCP

  Babajan-B

  A

  license

  -Not graded

  quality

  C

  maintenance

  A professional MCP server for comprehensive bioinformatics quality control, providing automated FastQC/MultiQC analysis, HTML report parsing, and advanced data visualization for sequencing data.

  Updated 10 months ago (2025-12-06 19:52 UTC)

  1

  MIT

• methods-mcp

  webwebb56

  A

  license

  -Not graded

  quality

  D

  maintenance

  Provides MCP tool adapters for Bioconductor methods like limma, DESeq2, and fgsea, enabling statistical analysis of omics data through containerized R execution. It serves as a bridge between MCP clients and bioinformatics tools for reproducible research workflows.

  Updated 5 months ago (2026-04-18 04:46 UTC)

  Apache 2.0