geo-mcp
Related Servers
Alternatives to geo-mcp
No user-submitted related servers found.
Related Servers
- FlicenseNot gradedqualityNot gradedmaintenanceProvides access to NCBI's scientific databases including E-utilities, PubChem, and PMC APIs for biomedical literature search, molecular data retrieval, and research through natural language queries.3-
- AlicenseCqualityFmaintenanceProvides AI-powered access to major biological databases for GWAS and bioinformatics research. Enables natural language queries for protein, gene, variant, pathway, and drug discovery analysis.441MIT

igvf-portal-mcpofficial
AlicenseNot gradedqualityBmaintenanceEnables AI agents to search, filter, download files, and generate reports from the IGVF Data Portal using natural language commands.2MIT- FlicenseNot gradedqualityDmaintenanceProvides seamless access to over 35 million PubMed scientific articles through natural language queries for research discovery and analysis. It enables tools for advanced searches, retrieving article details, and exploring related research within the life sciences and biomedical fields.13-
- AlicenseNot gradedqualityAmaintenanceEnables natural language search and discovery of open-access scientific datasets through the EOSC Data Commons OpenSearch service. Provides tools to search datasets and retrieve file metadata using LLM-assisted queries.14MIT
- AlicenseNot gradedqualityCmaintenanceEnables querying and browsing ontologies from the EBI Ontology Lookup Service, including searching for terms, retrieving term details, and navigating ontology hierarchies via natural language.15 npmMIT
TDQS
Scored across 11 tools
Each tool targets a distinct resource or action: search tools are differentiated by GEO record type (series, samples, platforms, datasets, profiles) plus a general search; download and management tools are clearly distinct (download, stats, status, list, cleanup). No overlapping purposes.
Most tools follow a consistent verb_noun pattern (e.g., download_geo_data, search_geo_series). The outlier is cleanup_downloads_tool, which uses 'cleanup' instead of 'clean' and has a '_tool' suffix, breaking the pattern slightly.
11 tools is well-scoped for a GEO MCP server, covering search across key record types, download operations, and dataset management. The number feels appropriate—neither too few nor excessive.
The server provides comprehensive search, download, and management capabilities for GEO data. Potential gaps include the absence of an explicit delete operation for individual datasets (cleanup is a blanket operation) and lack of upload or update functionality, but these are peripheral to the primary purpose.