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Augmented-Nature

Unofficial PubChem MCP Server

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      An MCP server that provides tools for querying the PubChem database for detailed information on chemical compounds, substances, bioassays, and molecular properties. It enables users to search by name, structure, or identifier to retrieve chemical classifications and cross-references through natural language.
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    • A
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      Enables comprehensive access to PubChem's chemical database with over 110 million compounds. Supports chemical searches, structure analysis, bioactivity data, safety information, and molecular property calculations through 30 specialized tools.
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    TDQS

    B3.2/5.0

    Scored across 30 tools

    Disambiguation4/5

    Most tools have distinct purposes, but some overlap exists, such as 'search_compounds' (general search) and specific search tools like 'search_by_smiles' or 'search_by_cas_number', which could cause minor confusion. However, descriptions clarify their specific use cases, making them generally distinguishable.

    Naming Consistency5/5

    Tool names follow a highly consistent verb_noun pattern throughout, using snake_case uniformly. Examples include 'get_compound_info', 'search_by_smiles', and 'predict_admet_properties', with no deviations in style or convention.

    Tool Count3/5

    With 30 tools, the count is borderline high for a PubChem server, as it may feel heavy and potentially overwhelming. However, given the comprehensive domain of chemical data analysis, it is reasonable but could benefit from consolidation or better scoping.

    Completeness5/5

    The tool set provides extensive coverage for chemical data retrieval, analysis, and search, including CRUD-like operations (e.g., get, search, analyze) and specialized functions like toxicity assessment and ADMET prediction. No obvious gaps are present for the domain.

    Maintenance

    ActivityInactive
    ResponsivenessUnresponsive