MolMIM MCP Server

# MolMIM MCP Server Dockerfile FROM python:3.10-slim-bullseye # Set working directory WORKDIR /app # Install system dependencies including X11 libraries for RDKit RUN apt-get update && apt-get install -y \ gcc \ xvfb \ libxrender1 \ libxext6 \ libsm6 \ libx11-6 \ libfontconfig1 \ libglib2.0-0 \ libcairo2 \ libpango-1.0-0 \ libpangocairo-1.0-0 \ libgdk-pixbuf2.0-0 \ libgtk-3-0 \ && rm -rf /var/lib/apt/lists/* # Copy requirements and install Python dependencies COPY requirements.txt . RUN pip install --no-cache-dir -r requirements.txt # Copy server code and entrypoint script COPY . . # Make entrypoint script executable RUN chmod +x entrypoint.sh # Create non-root user for security RUN useradd --create-home --shell /bin/bash molmim && \ chown -R molmim:molmim /app USER molmim # Expose default HTTP Streamable port EXPOSE 8001 # Set default environment variables ENV MCP_TRANSPORT=http-streamable ENV MCP_HOST=0.0.0.0 ENV MCP_PORT=8001 ENV PYTHONUNBUFFERED=1 ENV DOCKER_CONTAINER=true # Set virtual display for headless environments ENV DISPLAY=:99 # Health check HEALTHCHECK --interval=30s --timeout=10s --start-period=5s --retries=3 \ CMD python -c "import requests; requests.get('http://localhost:8001/health', timeout=5)" || exit 1 # Use entrypoint script ENTRYPOINT ["./entrypoint.sh"]