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mfiume

Omics AI MCP Server

by mfiume

sql_search

Execute SQL queries against genomics research datasets using Trino syntax to analyze and explore data collections for scientific discovery.

Instructions

Execute a SQL query against a collection using Trino syntax

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
networkYesNetwork name or URL
collection_slugYesCollection slug name
sqlYesSQL query string (use Trino syntax with double quotes for identifiers)
max_pollsNoMaximum number of polling attempts (default: 10)
poll_intervalNoSeconds to wait between polls (default: 2.0)
access_tokenNoOptional access token for authentication

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