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name: CI on: pull_request: push: branches: - main jobs: lint-type-test: name: Lint, Type Check, and Test runs-on: ubuntu-latest strategy: fail-fast: false matrix: python-version: ["3.11", "3.12"] steps: - name: Checkout repository uses: actions/checkout@v6 - name: Set up Python uses: actions/setup-python@v6 with: python-version: ${{ matrix.python-version }} - name: Install uv run: pip install -U uv - name: Sync dependencies run: uv sync --all-extras - name: Ruff lint run: uv tool run ruff check . - name: Ruff format check run: uv tool run ruff format --check . - name: Mypy run: uv tool run mypy src - name: Pytest (with coverage) run: | uv run pytest --maxfail=1 --cov=uniprot_mcp --cov-report=xml --cov-report=term-missing - name: Upload coverage report if: ${{ env.ACT != 'true' }} uses: actions/upload-artifact@v5 with: name: coverage-${{ matrix.python-version }} path: coverage.xml

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