run-all-tests.ts•4.77 kB
#!/usr/bin/env node
/**
* Master test runner for all Ensembl MCP tools
* Runs comprehensive tests for all 10 tools and provides summary
*/
import { spawn } from "child_process";
import { fileURLToPath } from "url";
import { dirname, join } from "path";
const __filename = fileURLToPath(import.meta.url);
const __dirname = dirname(__filename);
const testFiles = [
"test-meta.ts",
"test-lookup.ts",
"test-sequence.ts",
"test-feature-overlap.ts",
"test-regulatory.ts",
"test-protein-features.ts",
"test-mapping.ts",
"test-compara.ts",
"test-variation.ts",
"test-ontotax.ts",
];
const testDescriptions: Record<string, string> = {
"test-meta.ts": "Server metadata, species info, assemblies",
"test-lookup.ts": "ID/symbol lookup, cross-references, variant recoding",
"test-sequence.ts": "DNA/RNA/protein sequence retrieval",
"test-feature-overlap.ts": "Genomic feature overlap queries",
"test-regulatory.ts": "Regulatory features and binding matrices",
"test-protein-features.ts": "Protein domains and functional annotations",
"test-mapping.ts": "Coordinate transformations and assembly lifts",
"test-compara.ts": "Comparative genomics: homology, gene trees",
"test-variation.ts": "Variant analysis, VEP, LD, phenotypes",
"test-ontotax.ts": "Ontology and taxonomy searches",
};
interface TestResult {
file: string;
success: boolean;
duration: number;
error?: string;
}
async function runTest(testFile: string): Promise<TestResult> {
return new Promise((resolve) => {
const startTime = Date.now();
console.log(`\n${"=".repeat(80)}`);
console.log(`🚀 Running ${testFile}`);
console.log(` ${testDescriptions[testFile]}`);
console.log(`${"=".repeat(80)}`);
const testPath = join(__dirname, testFile);
const child = spawn("tsx", [testPath], {
stdio: "inherit",
});
child.on("close", (code) => {
const duration = (Date.now() - startTime) / 1000;
const status = code === 0 ? "✅ PASSED" : "❌ FAILED";
console.log(
`\n${status} - ${testFile} completed in ${duration.toFixed(2)}s`
);
resolve({
file: testFile,
success: code === 0,
duration: parseFloat(duration.toFixed(2)),
});
});
child.on("error", (error) => {
const duration = (Date.now() - startTime) / 1000;
console.log(
`\n❌ ERROR - ${testFile} failed with error: ${error.message}`
);
resolve({
file: testFile,
success: false,
duration: parseFloat(duration.toFixed(2)),
error: error.message,
});
});
});
}
async function runAllTests(): Promise<void> {
const startTime = Date.now();
console.log("🧬 Ensembl MCP Server - Comprehensive Tool Test Suite");
console.log(`📊 Running tests for ${testFiles.length} tools\n`);
const results: TestResult[] = [];
for (const testFile of testFiles) {
const result = await runTest(testFile);
results.push(result);
}
// Summary report
const totalDuration = ((Date.now() - startTime) / 1000).toFixed(2);
const passed = results.filter((r) => r.success).length;
const failed = results.filter((r) => !r.success).length;
console.log(`\n${"=".repeat(80)}`);
console.log("📊 TEST SUMMARY REPORT");
console.log(`${"=".repeat(80)}`);
console.log(`Total tests run: ${results.length}`);
console.log(`✅ Passed: ${passed}`);
console.log(`❌ Failed: ${failed}`);
console.log(`⏱️ Total time: ${totalDuration}s`);
console.log(
`📈 Success rate: ${((passed / results.length) * 100).toFixed(1)}%`
);
console.log(`\n📋 Individual Test Results:`);
results.forEach((result) => {
const status = result.success ? "✅" : "❌";
const duration = result.duration.toFixed(2).padStart(6);
const testName = result.file.replace(".ts", "").padEnd(25);
console.log(` ${status} ${testName} ${duration}s`);
if (result.error) {
console.log(` Error: ${result.error}`);
}
});
if (failed > 0) {
console.log(
`\n⚠️ ${failed} test(s) failed. Check the output above for details.`
);
console.log(" Common issues:");
console.log(" - Network connectivity to rest.ensembl.org");
console.log(" - Rate limiting (tests include delays)");
console.log(" - Invalid test data or API changes");
} else {
console.log(
`\n🎉 All tests passed! The Ensembl MCP server is working correctly.`
);
}
console.log(`\n💡 To run individual tests: tsx tests/<test-name>.ts`);
console.log(" Example: tsx tests/test-lookup.ts");
process.exit(failed > 0 ? 1 : 0);
}
// Run the test suite
runAllTests().catch((error: unknown) => {
console.error("❌ Test runner failed:", error);
process.exit(1);
});