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# Pull Request
## 📝 Description
Brief description of the changes made.
## 🔧 Type of Change
- [ ] 🐛 Bug fix (non-breaking change which fixes an issue)
- [ ] ✨ New feature (non-breaking change which adds functionality)
- [ ] 💥 Breaking change (fix or feature that would cause existing functionality to not work as expected)
- [ ] 📚 Documentation update
- [ ] 🧬 New MCP server
- [ ] 🔧 Maintenance (refactoring, dependencies, etc.)
## 🧪 Affected Repositories
- [ ] bio-mcp-blast
- [ ] bio-mcp-samtools
- [ ] bio-mcp-bwa
- [ ] bio-mcp-seqkit
- [ ] bio-mcp-queue
- [ ] bio-mcp-template
- [ ] Documentation
- [ ] Organization files
## 🧬 Testing
- [ ] Tests pass locally with `pytest`
- [ ] Added tests for new functionality
- [ ] Tested with real bioinformatics data
- [ ] Tested in Docker environment
- [ ] Tested queue integration (if applicable)
- [ ] Manual testing completed
## ✅ Checklist
- [ ] Code follows the project's style guidelines
- [ ] Self-review of code completed
- [ ] Documentation updated (if needed)
- [ ] Added appropriate error handling
- [ ] File size limits considered
- [ ] Security implications reviewed
- [ ] No sensitive data in logs
- [ ] Temporary files properly cleaned up
## 🔬 Bioinformatics Context
- [ ] Tool parameters match biological conventions
- [ ] File format handling is correct
- [ ] Error messages are scientifically meaningful
- [ ] Edge cases in biological data considered
## 📊 Performance Impact
- [ ] Memory usage considered for large files
- [ ] Timeout settings appropriate for data size
- [ ] No performance regression introduced
- [ ] Scalability implications reviewed
## 📝 Additional Notes
Any additional information that reviewers should know about this PR.
## 🔗 Related Issues
Closes #(issue_number)
Related to #(issue_number)