Server Configuration
Describes the environment variables required to run the server.
| Name | Required | Description | Default |
|---|---|---|---|
| BIO_MCP_TIMEOUT | No | Command timeout in seconds | 3600 |
| BIO_MCP_BWA_PATH | No | Path to BWA executable (default: finds in PATH) | |
| BIO_MCP_TEMP_DIR | No | Temporary directory for processing | |
| BIO_MCP_MAX_FILE_SIZE | No | Maximum input file size in bytes (default: 50GB) | 53687091200 |
Tools
Functions exposed to the LLM to take actions
| Name | Description |
|---|---|
No tools | |
Prompts
Interactive templates invoked by user choice
| Name | Description |
|---|---|
No prompts | |
Resources
Contextual data attached and managed by the client
| Name | Description |
|---|---|
No resources | |