UniProt MCP Server

MIT License

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compare_proteins

Analyze and align multiple protein sequences side-by-side to compare their features and structures using UniProt accession numbers. Supports output in JSON or TSV formats.

Instructions

Compare multiple proteins side-by-side with sequence and feature comparison

Input Schema

Name	Required	Description	Default
`accessions`	Yes	Array of UniProt accession numbers (2-10)
`format`	No	Output format (default: json)

Input Schema (JSON Schema)

{
  "properties": {
    "accessions": {
      "description": "Array of UniProt accession numbers (2-10)",
      "items": {
        "type": "string"
      },
      "maxItems": 10,
      "minItems": 2,
      "type": "array"
    },
    "format": {
      "description": "Output format (default: json)",
      "enum": [
        "json",
        "tsv"
      ],
      "type": "string"
    }
  },
  "required": [
    "accessions"
  ],
  "type": "object"
}

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