"How to write a query in Elasticsearch" matching MCP connectors:
GET /v1/connectors – MCP directory API referenceMatching Connector Tools:
Official STRING database MCP server. Query for protein-protein interactions, enrichment, annotations, homology, and PPI networks.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
BioBricks: the site's own MCP server — dataset, enquiry (enquiry = a human handoff, not a...
Cancer gene co-occurrence and exclusivity in tumour cohorts, with confound controls and exact tests.
HLA nomenclature and match checks against a pinned IPD-IMGT/HLA release. No patient identifiers.
Query CAN-IMMUNE: cancer neoantigen mutations, peptides, cell lines, MHC-I binding. Read-only.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
CIViC — Clinical Interpretation of Variants in Cancer.
g:Profiler (University of Tartu) — functional enrichment analysis for a gene list against GO…
PDBe (Protein Data Bank in Europe, EBI) MCP.
Serves the user's personal DNA wellness report to their AI: caffeine response, sleep timing, training, nutrient absorption. Built from a hand-checked evidence base (GWAS Catalog, PharmGKB); every finding states its effect size and links to its source paper. No disease risk scores. The raw DNA file is parsed in the user's browser and never uploaded.
