"How to query MySQL data on a server" matching MCP connectors:
GET /v1/connectors – MCP directory API referenceMatching Connector Tools:
Due diligence on life-science claims: omics, trials, gene therapy. Dimension by dimension.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.
Protein research over UniProtKB — search by function, fetch curated records, map IDs, proteomes.
Look up allele frequencies by ancestry, gene constraint, variants, and coverage over gnomAD.
Search GBIF species taxonomy, occurrence records, datasets, and publishers.
Sovereign intelligence dossiers, daily briefings, RAG search, knowledge graph, codon optimizer.
Collaborative BrAPI v2.1 MCP workspace — studies, germplasm, genotypes across Breedbase, T3, more.
HLA nomenclature and match checks against a pinned IPD-IMGT/HLA release. No patient identifiers.
PK serum simulation, reconstitution math and compound data for agents. Paid tools $0.01 via x402.
Query CAN-IMMUNE: cancer neoantigen mutations, peptides, cell lines, MHC-I binding. Read-only.
Query STRING interactions, enrichment, annotations, homology, and PPI networks.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
Biomedical data: compounds, drug info, and molecular targets
PatSnap Biology Modality MCP server — access biological sequences, modification records, and antibody-antigen interactions across 200M+ patents.
EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository.
BOLD Systems (Barcode of Life Data System, University of Guelph) — the global DNA barcode…
PDBe (Protein Data Bank in Europe, EBI) MCP.
