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Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.
Protein research over UniProtKB — search by function, fetch curated records, map IDs, proteomes.
Look up allele frequencies by ancestry, gene constraint, variants, and coverage over gnomAD.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Search GBIF species taxonomy, occurrence records, datasets, and publishers.
Collaborative BrAPI v2.1 MCP workspace — studies, germplasm, genotypes across Breedbase, T3, more.
BioBricks: the site's own MCP server — dataset, enquiry (enquiry = a human handoff, not a...
Deterministic peptide reconstitution and dosing math, so assistants compute it instead of guessing.
Query STRING interactions, enrichment, annotations, homology, and PPI networks.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
PatSnap Biology Modality MCP server — access biological sequences, modification records, and antibody-antigen interactions across 200M+ patents.
BioModels — the public repository of curated, executable mathematical models of biological systems…
KEGG REST MCP — Kyoto Encyclopedia of Genes and Genomes.
Rhea MCP — expert-curated database of biochemical reactions.
GWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies.
European Nucleotide Archive (ENA) — EMBL-EBI's public record of raw sequencing runs, assemblies…
CIViC — Clinical Interpretation of Variants in Cancer.
BOLD Systems (Barcode of Life Data System, University of Guelph) — the global DNA barcode…
NCBI Datasets — the US National Library of Medicine's genome, gene and taxonomy reference service…
g:Profiler (University of Tartu) — functional enrichment analysis for a gene list against GO…