"AI Model CLI Tools and Orchestration Configuration" matching MCP connectors:
GET /v1/connectors – MCP directory API referenceMatching Connector Tools:
Connect AI assistants to your personal health records, blood test results, and biomarker trends through a secure MCP server.
Pharmacogenomics for AI agents: cited drug–gene, gene and rsID lookups plus a medication screen.
Germline ACMG/AMP classification, genes, disease associations, literature and API-key case analysis.
Diagnoses, drugs & lab codes: ICD-11, LOINC, RxNorm, MeSH, ATC, CID-10. 33 tools, MIT.
Ancestry on G25 and raw DNA: nMonte fits, PCAs, GEDmatch-style and G25 calculators, qpAdm models.
Query STRING interactions, enrichment, annotations, homology, and PPI networks.
Read-only MCP connector for The Dose Guy source-linked peptide and compound database. Search 260+ compounds, compare vendors and prices, inspect ranking evidence, and retrieve canonical page links. No authentication required.
Run protein folding, docking, design and sequence analysis tools, and read their results.
Search biomedical papers, inspect publication records, and traverse citation or semantic graphs.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
UniProt protein data: find proteins, map genes to proteins, function and disease links
Ancestry allele frequencies, LoF constraint, variant lists, and coverage from gnomAD, with ClinVar.
Biomedical data: compounds, drug info, and molecular targets
Search GBIF species taxonomy, occurrence records, datasets, and publishers.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
PubTator 3 MCP — biomedical entity search, literature search with entity highlighting, and…
Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.
Resolve WoRMS marine species names; fetch classifications, synonyms, distributions, traits, and IDs.
PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.
KEGG REST MCP — Kyoto Encyclopedia of Genes and Genomes.
Read-only psilocin human-neuron gene results, pathway sensitivities and archived provenance.
NCBI Datasets — the US National Library of Medicine's genome, gene and taxonomy reference service…
NCI Thesaurus concepts and the other cancer-research vocabularies served by NCI Enterprise…
106 deterministic medical research tools: stats, survival, bioinformatics, primers. Auditable.
Search InterPro entries, map domains onto proteins and PDB structures, and scan raw sequences.
dbSNP refSNP records and HGVS/SPDI/rsID normalization for human genetic variants, from NCBI…
Find pharmacogenomics guidelines, translate diplotypes, and retrieve prescribing recommendations.
CATNAP (Compile, Analyze, and Tally Neutralizing Antibody Panels) + the LANL HIV Molecular…
Validated molecular biology tools: cloning, primers, CRISPR, Sanger, alignment, qPCR, phylogenetics
Gene expression experiments and the brain structure ontology from the Allen Institute's Brain…
