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Scientific plotting for bioinformatics with about 160 free modules. Anonymous access supported.
Germline ACMG/AMP classification, genes, disease associations, literature and API-key case analysis.
Ancestry on G25 and raw DNA: nMonte fits, PCAs, GEDmatch-style and G25 calculators, qpAdm models.
Query STRING interactions, enrichment, annotations, homology, and PPI networks.
Pharmacogenomics for AI agents: cited drug–gene, gene and rsID lookups plus a medication screen.
Read-only MCP connector for The Dose Guy source-linked peptide and compound database. Search 260+ compounds, compare vendors and prices, inspect ranking evidence, and retrieve canonical page links. No authentication required.
Run protein folding, docking, design and sequence analysis tools, and read their results.
Search biomedical papers, inspect publication records, and traverse citation or semantic graphs.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
UniProt protein data: find proteins, map genes to proteins, function and disease links
Ancestry allele frequencies, LoF constraint, variant lists, and coverage from gnomAD, with ClinVar.
UCSC Genome Browser REST API — reference genome assemblies for ~250 species, the annotation tracks…
Search GBIF species taxonomy, occurrence records, datasets, and publishers.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Biomedical data: compounds, drug info, and molecular targets
PubTator 3 MCP — biomedical entity search, literature search with entity highlighting, and…
Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.
Resolve WoRMS marine species names; fetch classifications, synonyms, distributions, traits, and IDs.
dbSNP refSNP records and HGVS/SPDI/rsID normalization for human genetic variants, from NCBI…
Read-only psilocin human-neuron gene results, pathway sensitivities and archived provenance.
g:Profiler (University of Tartu) — functional enrichment analysis for a gene list against GO…
NCI Thesaurus concepts and the other cancer-research vocabularies served by NCI Enterprise…
KEGG REST MCP — Kyoto Encyclopedia of Genes and Genomes.
Search InterPro entries, map domains onto proteins and PDB structures, and scan raw sequences.
NCBI Datasets — the US National Library of Medicine's genome, gene and taxonomy reference service…
CATNAP (Compile, Analyze, and Tally Neutralizing Antibody Panels) + the LANL HIV Molecular…
Find pharmacogenomics guidelines, translate diplotypes, and retrieve prescribing recommendations.
Gene expression experiments and the brain structure ontology from the Allen Institute's Brain…
GWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies. Look up a SNP…
Annotate and classify human genetic variants with GeneBe (ACMG, gnomAD, ClinVar). Research use only.
