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Protein Atlas

by io.github.pipeworx-io

Polymarket Edges

polymarket_edges
Read-onlyIdempotent

Scan top Polymarket markets and return opportunities where Pipeworx data disagrees with market price. Built for "what should I bet on today" — agents discover opportunities without paging hundreds of markets. FIVE MODEL FAMILIES grouped into three response segments under by_segment: (1) MODEL_DRIVEN — crypto_price (lognormal barrier from 90d FRED log-returns) and news_momentum (GDELT 7d/21d article-volume ratio, soft signal w/ halved Kelly). (2) STRUCTURAL_ARBITRAGE — partition_overround on mutually-exclusive events; per-leg favorite-longshot bias correction with per-sport α (tennis 1.02, soccer 1.10, MMA 1.15, default 1.0); placeholder-slug filter drops will-person-X / will-team-Y / will-manager-Z / will-someone-else- backstops; partitions with >20% placeholder fraction skipped entirely. (3) CONCENTRATED_LONGSHOT — basket trade when one leg ≥75% AND ≥2 longshots ≤8% AND portfolio return ≥25:1; rare-by-design (gates relaxed Run 8 from prior 85%/5%/50:1). EVERY OPPORTUNITY carries edge_pp_net (after slippage), kelly_fraction + kelly_fraction_half (capped at 0.25), market.liquidity, market.spread_pp, market.volume, plus a 24h-move warning ("Market moved X.Xpp in 24h") when the recent move alone exceeds the edge — your edge may already be in the price. TRADEABLE-EDGE KNOBS: min_liquidity / max_spread_pp drop opportunities where edge isn't realizable; min_partition_leg_kelly filters partitions by best per-leg Kelly. RESPONSE TOP-LEVEL: by_segment{model_driven,structural_arbitrage,concentrated_longshot}, fed_candidates/fed_note (Fed bets surface here, excluded from ranking — 1m-T vs EFFR signal is unreliable at meeting-month horizons without paid OIS/SOFR-futures data), and _diagnostics{concentrated_longshot:{...funnel counters},category_counts,filter_skips} so callers can see WHY a segment is empty (top-N stale, all candidates failed gates, knob dropped them). Cached 1h at the KV level keyed on all knobs.

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
limitNoTop N edges to return after ranking. Default 10, max 25.
windowNoPolymarket volume window to filter markets. Default 1wk.
min_kellyNoMinimum half-Kelly fraction (as decimal, e.g. 0.005 = 0.5% of bankroll) to include single-leg opportunities. Default 0 (no filter). Skips opportunities that are too small to bet sensibly even if the edge is large.
min_edge_ppNoMinimum |edge| in percentage points to include (default 0.5). Edge is evaluated NET of slippage.
slippage_ppNoAssumed execution slippage in percentage points per leg (default 0.3). Subtracted from raw |edge| before ranking and Kelly sizing. Polymarket has zero trading fees as of 2024 but bid/ask + thin depth typically eats 20-50bp per trade. Bump for very thin partitions; drop to 0 if you have a smarter fill model.
max_spread_ppNoTradeable-edge filter. Maximum bid/ask spread in percentage points on the representative market. Default null (no filter). Set to 2 to require tight books — anything wider eats most plausible edges.
min_liquidityNoTradeable-edge filter. Minimum $ liquidity on the representative market (or for partition_overround, on at least one top_leg). Default 0 (no filter). Set to 5000 to drop thin-book opportunities where executing the edge would walk the book past breakeven.
category_filterNoComma-separated list to restrict the output: "model_driven" (crypto_price + news_momentum), "structural_arbitrage" (partition_overround), "concentrated_longshot". Combine like "model_driven,structural_arbitrage". Default: all.
min_partition_leg_kellyNoMinimum BEST per-leg half-Kelly fraction across a partition_overround opportunity's top_legs (or longshot_basket legs). Default 0 (no filter). Partition arbs always return kelly_fraction_half=0 at the parent level by design (basket trades don't compose to single-leg Kelly), so min_kelly never filters them — this knob applies to the per-leg Kelly inside top_legs instead. Use to suppress thin partitions whose individual leg edges aren't worth the per-leg slippage cost.

Schema Changelog

Changes observed during successful MCP inspections. Dates show when Glama detected each change.

  1. First observed

TDQS

A4.7/5.0
Behavior5/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations already indicate readOnlyHint=true (safe read operation) and destructiveHint=false. The description adds extensive behavioral detail: the three model families, edge calculation methodology, caching (1h at KV level), and diagnostics like filter_skips. This goes well beyond what annotations provide, offering full transparency into how the tool operates and handles edge cases.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness4/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is detailed and well-structured, starting with purpose, then segments, parameters, and diagnostics. While it is long, it avoids redundancy and every sentence adds value. It could be more concise, but the density is justified by the tool's complexity.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness5/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Despite no output schema, the description thoroughly explains the response structure (by_segment, fed_candidates, _diagnostics) and the fields within each opportunity (edge_pp_net, kelly_fraction, etc.). It also covers tradeable-edge knobs and caching. Given the high parameter count and model complexity, the description is very complete.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters5/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema coverage is 100% (all 9 parameters have descriptions). The description adds significant value beyond schema by explaining parameter usage in context, e.g., slippage_pp includes Polymarket fee details and recommendations for different scenarios, and min_partition_leg_kelly explains when to use it. This helps agents select and set parameters correctly.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the tool's purpose: scan top Polymarket markets and return opportunities where Pipeworx data disagrees with market price. It specifies the resource (Polymarket markets) and action (scan and return opportunities), and the phrase 'Built for what should I bet on today' clarifies its intended use. It also distinguishes from sibling tools by detailing unique model families and segments.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines4/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The description provides context on when to use the tool ('what should I bet on today', 'agents discover opportunities without paging hundreds of markets') and explains its caching behavior and parameter knobs. While it doesn't explicitly mention alternatives or when not to use, the detailed context is sufficient for an agent to understand its applicability.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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TDQS

A3.6/5.0
Disambiguation2/5

Several tools have overlapping purposes: ask_pipeworx, ask_pipeworx_beta (currently identical), ask_pipeworx_grounded, deep_research, and validate_claim all handle routed research queries, while ai_visibility_check and scan_competitor_ai_presence overlap directly and the six Polymarket tools form a dense, easily confused cluster. The descriptions are detailed, but an agent will frequently struggle to pick the right tool among near-duplicate research and prediction-market options.

Naming Consistency3/5

Names are readable and mostly snake_case, with useful prefixes like ask_pipeworx_ and polymarket_. However, conventions are mixed: some are verb_noun (search_genes, get_protein, generate_llms_txt), some are bare verbs (remember, recall, forget), and some are noun phrases (entity_profile, recent_changes, top_tissues). There is no single predictable pattern.

Tool Count2/5

34 tools is above the 25+ threshold for a heavy, hard-to-navigate set, and most of them are not related to the server's stated 'Protein Atlas' identity. Only three tools actually concern proteins, while the rest form a general data-research, Polymarket, memory, and subscription toolkit that feels like several servers merged into one.

Completeness2/5

For a Protein Atlas server, the surface is severely incomplete: only search_genes, get_protein, and top_tissues cover HPA, leaving pathology, cell-line, single-cell, blood, and other major HPA dimensions unaddressed. If the intended domain is instead the broader Pipeworx data router, the protein tools are an odd vestige and the completeness story is still muddled by overlapping meta-tools.

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