Retrieve DNA sequences from genome assemblies using chromosome coordinates. Specify genome, chromosome, and optional start/end positions to extract specific genomic regions.
Retrieve DNA sequences from genome assemblies using chromosome coordinates. Specify genome, chromosome, and optional start/end positions to extract specific genomic regions.
Provides comprehensive access to the UCSC Genome Browser API, enabling queries of genomic data, DNA sequences, gene annotations, variants, and metadata across multiple species and assemblies.
Enables genomic sequence analysis through the Evo 2 model, supporting DNA sequence scoring, embedding, generation, and variant effect prediction with multiple model checkpoints (7B, 40B, 1B parameters).
Enables AI assistants to perform DNA/RNA sequence alignment using BWA (Burrows-Wheeler Aligner), supporting both short and long read alignment to reference genomes with indexing, BWA-MEM, and BWA-backtrack algorithms.