Search journal entries and knowledge notes by keyword or semantic query to quickly locate relevant information. Returns matching results with customizable limits.
Provides MCP tool adapters for Bioconductor methods like limma, DESeq2, and fgsea, enabling statistical analysis of omics data through containerized R execution. It serves as a bridge between MCP clients and bioinformatics tools for reproducible research workflows.
List knowledge base articles in a workspace to manage operational runbooks and troubleshooting notes. Filter by status or search content for programmatic KB access.
Fetch complete metadata for PubMed articles using PMIDs, including abstract, authors, journal, DOI, and MeSH terms. Ideal for retrieving full records from specific citations or search results.
Generates creative ideas and multi-perspective analysis on any topic, using project file context for relevant suggestions in design, content, problem-solving, and planning.
Determine proper accounting treatment by analyzing past journal patterns, fixed asset capitalization patterns, and relevant account items with tax codes.
Gathers recent content from selected sources to create a unified context for brainstorming. Supports library, meetings, news, ideas, and journal with optional date filters.