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Open-Source MCP servers

Production-ready MCP servers that extend AI capabilities through file access, database connections, API integrations, and other contextual services.

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7,731 servers. Last updated -

Matching MCP tools:

Matching MCP servers:

  • BioMCP

    genomoncology
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    Provides LLMs with structured access to critical biomedical databases including PubTator3 (PubMed/PMC), ClinicalTrials.gov, and MyVariant.info through the Model Context Protocol.
    Last updated -
    14
    230
    Python
    MIT License
    • Apple
    • Linux

  • PubTator-MCP-Server

    JackKuo666
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    🔍 A biomedical literature annotation and relationship mining server based on PubTator3, providing convenient access through the MCP interface.
    Last updated -
    5
    Python
    MIT License
    • Linux
    • Apple

  • BioContextAI Knowledgebase MCPofficial

    biocontext-ai
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    An MCP server that provides standardized access to biomedical knowledge bases and resources, enabling AI systems to retrieve verified information from sources like bioRxiv, EuropePMC, and various protein/gene databases.
    Last updated -
    52
    2
    Python
    Apache 2.0
    • Apple
    • Linux

  • Cloud Life Sciences API MCP Server

    ag2-mcp-servers
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    security
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    An MCP Server that provides access to Google Cloud Life Sciences API, enabling users to run biomedical workloads in the cloud through natural language interactions.
    Last updated -
    Python
    • Linux
    • Apple

  • PubMed MCP Server

    cyanheads
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    A bridge connecting AI agents to NCBI's PubMed database through the Model Context Protocol, enabling seamless searching, retrieval, and analysis of biomedical literature and data.
    Last updated -
    5
    1,006
    13
    TypeScript
    Apache 2.0

  • OpenGenes MCP Server

    longevity-genie
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    Provides standardized access to aging and longevity research data from the OpenGenes database, enabling AI assistants to query comprehensive biomedical datasets through SQL and structured interfaces.
    Last updated -
    3
    6
    Python
    MIT License

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  • Biolink MCP Server

    ag2-mcp-servers
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    security
    F
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    An MCP server that provides access to Monarch Initiative's biomedical data through the Biolink API, enabling agents to query biological entities, associations, and knowledge graphs using natural language.
    Last updated -
    Python

  • OrigeneMCP

    GENTEL-lab
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    security
    F
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    quality
    An advanced integrated MCP server platform that combines 600+ tools and multiple biomedical databases to enable comprehensive information retrieval across molecules, proteins, genes, and diseases for accelerating therapeutic research.
    Last updated -
    14
    Python

  • MCP PubMed Search

    wavelovey
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    Server to search PubMed (PubMed is a free, online database that allows users to search for biomedical and life sciences literature). I have created on a day MCP came out but was on vacation, I saw someone post similar server in your DB, but figured to post mine.
    Last updated -
    1
    30
    Python
    MIT License
    • Apple