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"Tools or methods for editing files using diffs" matching MCP servers:

  • methods-mcp

    webwebb56
    A
    license
    -
    quality
    D
    maintenance
    Provides MCP tool adapters for Bioconductor methods like limma, DESeq2, and fgsea, enabling statistical analysis of omics data through containerized R execution. It serves as a bridge between MCP clients and bioinformatics tools for reproducible research workflows.
    Last updated
    Apache 2.0

  • Google OR-Tools server

    Jacck
    A
    license
    -
    quality
    D
    maintenance
    MCP-ORTools integrates Google's OR-Tools constraint programming solver with Large Language Models through the MCP, enabling AI models to: Submit and validate constraint models Set model parameters Solve constraint satisfaction and optimization problems Retrieve and analyze solution
    Last updated
    21
    MIT

  • mcp-tools

    egnaro9
    F
    license
    A
    quality
    B
    maintenance
    Provides five safe tools (calc, search, model_drift, compare_runs, grade_answer) for arithmetic, keyword search, model drift monitoring, eval comparison, and answer grading against sources, all implemented directly from the MCP spec with zero dependencies.
    Last updated
    5
  • Files.com MCP Server by Files-com

    Files.com MCP Serverofficial

    Files-com
    A
    license
    C
    quality
    B
    maintenance
    Enables AI models to perform file operations, user management, automations, and more within Files.com's secure file transfer platform via the Model Context Protocol.
    Last updated
    65
    2
    MIT

  • TurboQuant Tools

    FreezeVII
    A
    license
    -
    quality
    C
    maintenance
    MCP server for compressing AI embeddings by 5-7x using TurboQuant (PolarQuant + QJL), with tools to compress, decompress, estimate savings, and embed+compress vectors.
    Last updated
    MIT

  • MCP Files

    tspspi
    A
    license
    -
    quality
    C
    maintenance
    Provides a secure, constrained filesystem workspace for LLM agents to manage files, notes, and code artifacts via stdio or remote HTTP. It features granular access controls, including extension whitelisting, storage quotas, and immutable paths for safe automated file operations.
    Last updated
    BSD 3-Clause

  • notebook-tools-mcp

    tony-zhelonkin
    A
    license
    -
    quality
    D
    maintenance
    MCP server for Jupyter notebook navigation and editing. Reads .ipynb files directly as JSON, providing efficient tools for reading, searching, and modifying cells without needing a Jupyter server.
    Last updated
    MIT

  • openevidence-tools

    drpwchen
    A
    license
    -
    quality
    C
    maintenance
    Enables clinical question answering via OpenEvidence with citation verification, including tools to ask questions, retrieve results, and follow up, plus an integrated skill to check citations against primary sources.
    Last updated
    2
    MIT

  • MCP Tools

    dlightyupgrade
    F
    license
    -
    quality
    C
    maintenance
    A modular multi-server architecture providing development automation, JIRA management, and performance reporting for Claude Code. It features specialized tools for PR health analysis, code reviews, and generating comprehensive team and individual quarterly reports.
    Last updated

  • msp-tools-mcp

    Jackson-DM
    F
    license
    A
    quality
    B
    maintenance
    Provides MSP support tools (ticket search, draft response, KB search, update) with a deterministic security guardrail that refuses to draft responses for security tickets based on content scanning, even if mislabeled.
    Last updated
    5
  • m-dev-tools-mcp by m-dev-tools

    m-dev-tools-mcpofficial

    m-dev-tools
    A
    license
    A
    quality
    A
    maintenance
    MCP server that exposes tools to route natural language queries to typed IDs, describe catalog entries, and list repository verification commands for the m-dev-tools organization.
    Last updated
    3
    AGPL 3.0